Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID65416 Trichostatin-a GSE92742 NPC Human 24h 10uM EID0361
Types Number Response transcription factors
Up-regulation 152 DRAP1; FOXO4; ZNF331; PPP1R13L; HBP1; NR1H2; NOC2L; STAT1; RUVBL1; PPARD; ASCL3; RUVBL2; ZNF212; ATF5; HDAC5; UBE2B; TULP4; SIRT2; IRF6; SND1; PSMD9; ETS1; IRF3; ING4; CREB3L2; PBXIP1; CALCOCO1; MXI1; ACTL6A; HIVEP2; CERS4; MYCBP; NR4A2; SMARCD2; TSC22D4; GTF2A2; TSG101; SPIB; TFCP2L1; MTF1; ZNF205; SIRT7; COPS5; SSBP2; ZSCAN32; SNIP1; SOX15; SMARCD3; MEF2D; DLX4; MBD2; ZNF544; CEBPD; HOXD1; TOB1; ELF3; ZNF131; PEX14; NFATC1; ZNF562; WWC1; HDAC1; SERTAD2; MED15; PIAS1; CCNC; TRIB3; RING1; EN1; ZNF611; MLXIP; TP63; USP16; TRPS1; CDK7; TRIM29; ZNF44; LITAF; JUNB; POU2AF1; NR0B2; JUND; CEBPB; LHX6; CD3D; CBX7; FOSB; HOXC10; ZNF593; TBX3; HEY2; FOXK2; IRX5; PCGF1; ZBTB20; SIX1; ZNF224; CBX6; CCNH; IKBKAP; JUP; VGLL1; ZNF468; ESRRG; BCL3; BRD4; ATF3; PEG3; IL16; OSR2; PAX5; SOX10; PURA; NR4A1; EYA2; PAWR; TCF7; CREG1; DBP; SOX13; MYBL1; NR3C2; IRF7; KLF6; NFIB; CUX1; NFATC3; SMARCA2; RBBP5; ZNF394; VPS72; RUNX3; RBBP8; ZNF160; NR1H3; BTG1; TFAP2A; CCNE1; NR0B1; FOXC1; INSR; YWHAB; ZBTB18; WT1; RUNX1; SOX9; CITED2; CITED1; MTF2; ZKSCAN1; CRK; ZNF91
Down-regulation 214 SOX2; HMG20B; USP22; SALL1; NUP62; BMI1; NFKBIA; MYCN; MTA1; PCBD1; PATZ1; SMARCA4; NRIP1; SMAD6; HNRNPD; TLE1; SMARCE1; HDAC2; PBRM1; TAF9B; LIN28A; ATF1; NFE2L1; GTF2I; PHF2; BRD3; ZFP36L2; RBBP4; ZEB2; HMGA2; CARHSP1; ZNF282; TCF12; LZTS1; PMS1; ZBED1; ZNF134; CCNA2; SCMH1; TFDP1; CREB1; ZFP64; ZNF84; HIRA; NFYB; LIMD1; ZNF189; ETS2; SOX4; ID4; SUV39H1; HMGB3; RAN; BRIP1; TADA2A; WDHD1; RFX7; ZFY; HMG20A; APEX1; ZNF248; HAND1; PPRC1; ALX1; NR2F6; FOXM1; EYA1; SUPT7L; NCOA2; STAT5B; POU5F1B; MEIS1; STAT6; NCOR1; SAP30; MAGED1; IFI16; ZBTB6; PITX2; ZMYND11; BCOR; ZNF302; MYRF; ERBB2; FUBP1; ZNF236; E2F3; PSIP1; ZNF532; SOX11; TCF3; DEK; ZEB1; PBX1; DNMT3B; SOX3; ZBTB1; ZIC3; ZNF146; UBE3A; ETV1; HMGB1; EHMT2; MYT1L; TOX3; ZNF22; CBX3; TGFB1I1; ZNF32; SOX17; NANOG; PHOX2B; ADNP; ZKSCAN7; PBX3; BNC2; BRCA2; SFMBT1; CBFB; BAZ1A; TLE4; TGIF2; HMGB2; TADA3; TDRD3; RLF; NR2C1; ATF4; PQBP1; GLI2; SUPT3H; WHSC1; SALL2; NR1I2; DDX17; BIRC2; VEZF1; SREBF2; FOXF1; ZNF529; MED4; YBX1; ISL1; TBL1X; NFKB1; BAZ2B; ZBTB38; GATA6; HMGN3; DDX5; FOXN3; MDM2; SIAH2; PLAG1; AEBP1; FLNA; NCOA6; BPTF; ZNF227; ARID4A; CTNNB1; BACH1; PRMT2; DACH1; MYB; ZNF43; HDAC9; CREB5; HDGF; CENPF; ZBED4; PMF1; KDM5D; UBE2L3; BCLAF1; BCL6; VGLL4; ZNF512B; MTDH; CUX2; ZNF232; TRIM27; GTF3A; FOXE1; HOXC6; NR2F1; ASCL1; ZMIZ1; EGR2; ZIC1; RBPMS; DNAJC1; PCGF2; AES; PIR; HIPK3; COPS2; DAXX; JAK2; BRCA1; MECOM; NCOR2; LEF1; ZNF423; ZFPM2; MED24; KLF10; HOXB6; SMAD3; ZMYND8; DMTF1; IRF4; NKX3-1; EGR3