Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID63380 Vorinostat GSE92742 SKB Human 24h 10uM EID0353
Types Number Response transcription factors
Up-regulation 113 SOX4; RUVBL1; SMARCA5; CRYM; PEG3; SIX1; NLK; RUVBL2; CTR9; PARP1; KAT6A; RERE; AFF1; BIRC2; PPARD; HINFP; TLE1; RBBP5; FOXJ3; CCNC; REST; SND1; STAT3; WWC1; TRIM16; HDAC3; MTF1; ZBTB11; BANP; C1D; NCOA3; ERF; SETD3; PSIP1; ELK3; ARNTL; MXD4; ENO1; ECD; TSC22D2; SMAD2; MTDH; ZBTB18; MEOX1; PREB; SMARCE1; MEIS1; ING2; PHF20; EDF1; CRK; HLTF; NEDD8; JARID2; SPEN; HOXD1; CAMTA1; HMG20B; MNAT1; ID3; DPF2; NUP62; HDAC1; NKX3-1; CEBPA; PMS1; PIAS2; MYCBP; RBPMS; PIAS1; RNF4; TSC22D4; HMGN3; YWHAB; SUB1; ZNF226; URI1; HDAC5; NPAT; GTF2A2; SMAD7; NR2F2; HIVEP2; DRAP1; TRIM28; CREM; TCEB2; NELFB; HIF1A; TADA3; BBX; PIAS3; NFIB; WWTR1; PAX6; HDAC2; IKBKAP; CITED2; ZBED2; TSC22D3; SMARCD3; ADRB2; RUNX3; FOSB; ZBTB38; FOXG1; TSC22D1; TCF4; NRBF2; RHOA; TLE4; BASP1; TOX3
Down-regulation 157 DNMT1; TCF3; CEBPG; HIRA; CTCF; KAT8; TP53; HSF1; HMGB2; ZFP36L2; DEK; HIC2; AGO2; HDAC4; ZNF512B; ZNF268; ZNF267; ZBED4; TBX21; CNBP; MAFF; HMGB1; ZNF770; ZEB2; BACH1; UBE3A; PAX5; EN1; HOXC4; MYF6; SIAH2; E2F3; RRN3; FOSL2; PCBD1; KLF11; ZNF266; HMGA1; ZNF43; TRIM22; TAF1A; ZNF562; ARL2BP; ZBTB16; MAZ; ZNF274; ZNF239; KAT6B; KMT2B; ZNF184; RBM39; KLF10; CIR1; ZNF136; CD3D; KLF9; NCOA2; TOX; RREB1; FOXM1; ZHX2; YEATS4; USP16; CBX5; MED15; GMNN; SOX13; SP140L; CEBPD; PNRC1; CCDC59; GCFC2; ZNF529; DDIT3; ING3; ZNF33B; MYOG; IFI16; TCF7L2; KLF2; CREBZF; TP63; TAF5L; ZNF215; MTA1; FOSL1; TFEC; ZNF74; BNC2; TGIF1; ZNF652; ELF1; MEIS2; ELF4; SMARCB1; TGFB1I1; ZNF85; TAL1; ZFX; MAX; PHF1; TGIF2; FOXD1; ZNF84; NCOA1; EYA2; PRDM10; BCL11A; PATZ1; FOXJ2; TFAP2C; MYBL1; ZNF573; ZNF140; ID4; ZNF350; ZNF394; BTG1; ZNF264; MNDA; FOXE1; FOXA2; HOXB7; ZNF107; FOXK2; ZNF83; EP300; LMCD1; SSBP3; KAT2B; SHOX2; SNAI2; SOHLH2; TRPS1; STAT6; SMAD3; ARID1A; CDK2; ZNF117; TBX2; NFATC4; KLF4; JUP; ST18; ZFP36L1; ZNF331; NR1D2; SOX17; AEBP1; ZNF589; RAD21; ARID5B; MEF2C; MAF; ATF5; ID1; TBX3