Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID63379	Trichostatin-a	GSE92742	SKB	Human	24h	10uM	EID0353

Response Information :

Types	Number	Response transcription factors
Up-regulation	144	CREB1; RUVBL1; SOX4; PEG3; MTF1; SIX1; PPARD; ZNF324; MYCBP; FOXJ3; TLE1; C1D; CTR9; ZBTB11; SETD3; PARP1; RBBP5; UBE2L3; RUVBL2; HABP4; SND1; STAT3; BIRC2; ZBTB1; TBL1X; ING2; TCFL5; CRY1; KMT2A; PMS1; ATF6; EZH2; HLTF; HINFP; SMARCA5; NEDD8; IL16; RYBP; KDM4A; KAT6A; SMAD2; ZNF165; SP140; BANP; WWC1; HDAC1; PREB; DACH1; NFRKB; NUP62; EDF1; HDAC3; MXD4; ZNF692; NFATC3; URI1; ZNF143; TBP; PIAS2; SREBF1; CHD9; PSIP1; CEBPA; BCL3; NR2F2; CRK; BRPF1; SF1; CXXC1; ARNTL; MLX; CERS6; DR1; MED1; TSC22D4; ENO1; SMAD1; MED24; IRF8; SOX10; YWHAB; SNIP1; JARID2; HMG20B; TADA3; PIAS3; SMARCD2; ESRRA; NR4A2; RUNX3; GTF2A2; KLF7; NPAT; DRAP1; C1QBP; TOB1; MNAT1; TRIM29; RERE; NKX3-1; NELFB; FOSB; ZNF552; SMARCE1; ZBTB18; RBPJ; PITX1; PURA; SMAD3; CITED2; RFC1; KDM2A; ATF2; CCNC; TCEB2; SP110; NRBF2; SATB2; ELK3; SERTAD2; CARM1; TSC22D2; TAF10; MNT; PBX1; ATF4; FOXO1; ZNF410; HDAC2; ZFHX4; FUBP1; SMARCD3; SUB1; IKBKAP; SAP30; ID3; ZNF331; RHOA; ZMIZ1; CCNE1; TCF4; MEF2C; BASP1; KDM5D
Down-regulation	189	TRIB3; ZFP36L2; CTCF; ZNF512B; SUPT3H; PCBD1; HSF1; TEAD4; DNMT1; MAFF; ARL2BP; SKI; TFAP2C; HIF3A; LIN28A; SIAH2; CD3D; HMGB1; TP53; RRN3; RREB1; EN1; ZNF770; SNAI2; FOXF2; LHX2; TRIM22; IFI16; KAT8; NPM1; FHL2; E4F1; ZNF444; HOXC4; ZBTB16; HIRA; MAML1; BACH1; HIC2; ZNF500; E2F4; TGFB1I1; TCF3; SOX18; TAL1; AGO2; TBX1; PRMT2; CTNNB1; CEBPD; ZNF354A; PNRC1; MTA1; GMNN; AEBP1; HMX1; PHIP; DDX17; HOXC10; SOX17; LHX1; SOX13; ZHX2; HMGB3; ZNF254; ZNF43; TCEA1; NCOA2; CREBZF; NFYB; MAZ; BRWD1; HOXA1; MED15; FOXE1; FOXM1; POLR3C; ZNF345; FOXI1; CNOT6; YAF2; CNBP; CEBPG; ZNF140; ST18; NANOG; SP140L; PLAGL1; PRRX1; LHX6; VGLL1; GRHL2; MITF; ZEB1; CDX1; YEATS2; NRIP1; MYCN; ZEB2; NPAS2; SMAD6; ZNF350; TFEC; HDAC4; PRDM1; ZNF85; ZNF529; NKX2-2; KAT6B; PSMC3; ZNF557; SOHLH2; MED12; KAT7; ZNF580; BAZ2B; TAF5L; FOSL2; OLIG2; CDK9; ZNF74; ZNF32; ZNF623; KLF9; PITX2; FOXJ2; TCF7L2; CDK2; CREBL2; TDRD3; STAT6; BNC2; NEUROD1; GATA6; FOSL1; NCOA1; NKX2-1; FOXA2; ZFPM2; SSBP3; CUX2; CBX7; ID4; ZNF136; KLF2; HOXB7; HEY1; RBM39; TDP2; RAD21; KAT2B; HMGB2; FOXO3; MED17; TERF1; NFE2L2; TGIF1; MEIS2; ELF4; PIR; LEF1; ZNF117; VGLL4; HOXA10; SMARCB1; HLX; MKL2; BCL11A; MYBL1; ZNF264; CARHSP1; HOXB2; GABPB1; TBX2; ZNF394; HOXC6; HHEX; HOXB6; ARID5B; OSR2; HDAC9; ZNF91; WT1; USP22; EYA2; NFATC4; ZIC1; TBX3; ID1