Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID63130 Trichostatin-a GSE92742 PHH Human 24h 10uM EID0352
Types Number Response transcription factors
Up-regulation 219 MYBL2; HDAC6; CREB1; TSC22D4; IRF8; CREG1; HMG20B; FOXD1; CREB3L1; ERCC2; MEF2D; HDAC5; EHMT1; PBXIP1; SIRT7; NAB2; FOXL2; TEAD4; SALL2; JUND; HOXC11; ETV1; BAZ2A; GTF2I; DRAP1; UBE2L3; KDM5B; NR1I3; SIN3B; CAMTA2; KAT7; SOX4; MED1; JUN; THRA; VPS72; RHOA; HIVEP2; IRF9; SPIB; SNAI1; ZNF143; ATF3; CBX6; HBP1; YBX2; FOXA2; CBX4; SOX13; CUX1; NLK; AES; ZNF671; ZKSCAN5; SUB1; BARX1; MLLT10; HMGN3; KDM4C; GABPA; MZF1; YWHAB; SMARCB1; HR; ZNF384; PAX5; TAF1C; RBPJ; KLF6; ERBB4; ING4; GTF2IRD1; CCNT1; RERE; TCFL5; MEF2A; ARNTL; SERTAD2; SMARCC2; IRF2; TCF7L1; MNX1; EMX2; CRYM; OSR2; SPDEF; IL16; SUPT4H1; HDAC7; SP2; RELB; TEAD3; KLF2; CALCOCO1; TAF9B; MTA1; PLAG1; NR2F1; BANP; SIX1; KLF12; SETDB1; NFATC1; MYCL; SETD3; DBP; CBX2; PKNOX2; FOSL1; TCF4; MYCBP; SMARCD1; LPIN2; SLC2A4RG; PURA; NEDD8; FOXF1; UIMC1; TBX19; IRF7; USP21; TAF6; SIX2; NFX1; HINFP; NFYC; ZNF34; STAT5B; STAT1; CBX7; IRF5; PIAS1; ARID5A; ELK4; MEIS2; BPTF; NR4A2; ING3; SMAD5; MECP2; SIX6; TRIM25; SUMO1; NR4A3; NR4A1; FOXO4; TBL1X; TULP3; RING1; DLX2; MLXIP; MEN1; FOSB; ERF; BATF3; GATA6; PSIP1; RBPMS; MEOX2; ADRB2; MAFF; BCL3; BLM; BACH2; OLIG2; TLE2; SMAD2; MNAT1; TLE4; IRF4; BCL6; PIAS3; EZH1; CENPF; RBL2; E2F2; CEBPD; HDAC2; CERS6; ZNF552; AIP; GLI2; MYRF; EGR3; ELF4; NFE2L3; ID2; HOXA11; TCF21; FOXG1; RFXANK; TXNIP; NCOA3; FOXC1; TSC22D1; ZNF516; ATF6; HOXD3; HIPK3; ZSCAN18; NFKB1; JUP; RXRA; FOS; HOXA5; PITX1; HOXB7; PBX1; RUNX3; BNC2; WWTR1; ABL1; ZNF589; TAL1; KLF9; ZBED2; NR3C1; TCEA2; LEF1
Down-regulation 198 IKBKAP; CEBPG; ATF5; CEBPA; RBM39; ZNF140; PEX2; CTNNB1; ZNF83; ZNF44; RARB; SUPT3H; EHF; ZNF614; MYC; USP22; FUBP1; GCFC2; SIM1; THAP4; ZNF91; ZNF562; BBX; MED7; NCOR1; TAF12; ZNF177; CNBP; MTDH; PMS1; ZSCAN12; KLF4; MGA; HAND1; MXI1; MYNN; TLE1; ZNF32; NFIB; NR0B1; NR1I2; ZEB2; CCNA2; PTRF; TBL1XR1; NR1H4; RORA; ZNF160; PFDN5; ID1; ZNF334; SNAI2; MBD2; SRCAP; FOXA1; BTAF1; ZNF430; ZNF232; SMAD9; CRK; RNF10; ZFP36L2; RREB1; ZNF146; ZNF721; SMAD4; ZIC3; SP140L; INSR; ZNF529; SAP30; TCF7L2; PQBP1; ZNF611; ZNF443; TCEA1; SOHLH2; ANKRD1; ISL1; EYA1; SF1; BCOR; CDX1; AR; E2F3; BAZ1A; VGLL4; ZNF263; NR5A2; ZEB1; UBE3A; ZNF292; MYBL1; LIN28A; SP3; RNF138; ZNF350; TRIM16; ZBTB38; ENO1; ZNF248; ZZZ3; SREBF1; ZNF136; CASZ1; HEY1; ZBTB16; NKX2-2; ZNF184; BCL11B; VDR; BHLHE41; PRKDC; ZBTB20; CREB5; PPRC1; RB1; MNDA; PIR; FHL5; NR2F2; GATAD2A; HMGB2; DEAF1; PSMC3; ZNF665; GABPB1; TAF11; ZFP64; CHD1; FHL2; CBX3; ZNF544; SMAD6; ZNF532; ZNF43; ENY2; ZNF281; AFF1; TRIM27; ARL2BP; BCL10; ZNF267; FLNA; XBP1; TCERG1; TP53; TRIM29; SPEN; TAF1D; IRX4; C1QBP; PHF20; PRRX1; YBX1; SMARCA4; ZNF85; BASP1; MAF; ZNF22; CARHSP1; ZNF165; ITGB3BP; EZH2; BAZ2B; BMI1; DACH1; HIRA; GFI1; HEY2; MEF2C; REPIN1; MSX1; SFPQ; PPARGC1A; COPS2; CD3D; ID4; HOXC6; ZFPM2; ZBTB18; CTBP2; RAN; NCOA4; ERBB2; HTATIP2; HMGB1; CEBPZ; ZMYM2; ELF5; TWIST1; NEUROD1; HMGB3; NANOG; AHR; ZIC1; AEBP1; POU2AF1