Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID60693	Trichostatin-a	GSE92742	SKB	Human	24h	10uM	EID0342

Response Information :

Types	Number	Response transcription factors
Up-regulation	187	IKZF1; TBX2; ZNF771; ABL1; TCF7L2; GFI1; GMEB2; HEY2; MED27; KDM4C; PSMC3; PRDM12; GATA6; RXRA; KLF15; HIPK2; HSF4; CXXC1; HOXA5; RHOA; E4F1; INSR; PITX3; TAF6L; NOC2L; KLF7; DBP; SMARCB1; BARX1; PDLIM1; HMX1; TBX21; MYRF; CEBPE; PROP1; RUVBL1; SIX3; WHSC1; MXI1; PIAS4; SAFB; JAK2; EP300; PHF1; NR1I3; ZNF335; KLF3; SIRT2; NFIC; RFXANK; ZNF408; LHX3; AIP; PRPF6; EYA1; HDAC4; NCOA1; SIX2; ZNF215; ZNF93; KLF11; ZNF444; TCF21; PIAS1; HDGF; TGIF2; MAFF; MLXIP; HSF1; HOXB5; CSDC2; ZNF219; E2F6; ZNF671; SREBF1; BACH2; USP21; CHAF1B; ZNF711; ZNF500; RBM39; UBE2I; BHLHE40; MYCN; WDR77; GATA1; EN1; PRDM1; ZNF593; BCL3; TCEB2; SETD3; FOXL2; SOX13; TFAP2A; ID4; VPS72; NFE2L3; HIRA; CD3D; WNT4; MYBL1; FOXO3; ZNF580; DLX2; PBXIP1; SMAD6; ZNF423; MEIS2; SRY; MKL1; ZNF239; RING1; AATF; FLI1; TWIST1; FOXO1; COPS5; XRCC6; ZNF22; NFE2; TP53; SMAD3; HMGB3; KAT2B; ZNF467; TGS1; BRD4; ZNF268; HOXC8; MAFG; SNAI1; TFDP2; SCAND1; ZNF516; ESRRG; DLX5; ID1; ID3; CARHSP1; HOXD11; BTG1; IRF1; KLF1; E2F8; HOXB7; ZNF91; HMGB1; HOXD10; LITAF; NFATC1; TGFB1I1; DDX17; ZNF232; LMCD1; STAT4; TAL1; MNDA; KLF6; PBX3; PHOX2B; ETV5; IRF6; CSDE1; WWC1; TGIF1; ZHX2; HOXB6; WT1; SOHLH2; CEBPD; IL16; BATF; TCEA2; SOX9; BCL11A; KLF9; CHD7; CBFA2T3; ZNF331; HHEX; SALL1; ARNT2; NR2F6; ZNF586; POU2AF1; NFATC3
Down-regulation	195	XBP1; TSC22D3; FOXA1; PLAGL1; RAD21; MYC; RBPMS; ATF1; USP22; FOXJ3; REST; NUP62; CHD9; CLOCK; CCDC59; DNAJC2; PPARG; RNF4; CRYM; UBP1; CREB3; ZNF226; NR4A1; CCNT1; IRF8; PHF8; NLK; TOPORS; CBX3; HMGN3; PCBD1; TSC22D1; SHOX2; CRK; TMF1; ZNF529; NR3C1; STAT6; HOXB13; C1D; PPARGC1A; BAZ2B; ATF2; CDK7; HIF1A; RNF6; MAGED1; IKBKAP; ECD; TOB1; ZNF652; NCOA4; MTDH; SFPQ; ZNF146; TFCP2L1; ZBTB11; TRIM22; PHF20; ZNF189; ZNF12; ZNF468; ZZZ3; ZNF432; MED23; CCNC; HOXD1; STAT1; AHR; PATZ1; SP100; SMAD7; ZNF623; PRMT2; NKX3-1; MED4; EGR3; YBX1; CHD3; ZBED1; RYBP; ZKSCAN1; ITGB3BP; BAZ1A; PLAGL2; GTF2IRD1; ETS2; MEOX2; ST18; CTR9; TRIP6; POLR2A; CBX5; BASP1; BAZ1B; NFKB1; ETV1; UBE2B; NEDD8; JUNB; SCAI; HOXA10; NCOR2; EGR2; ZNF329; NRIP1; MKL2; ZNF443; BHLHE41; ZBTB1; TRRAP; ZNF813; TLE2; ZFP64; AFF1; HOXC6; CRY1; ZNF536; MEOX1; NFYB; ERBB2; BCL10; TRIM28; YWHAB; TFAM; RNF111; IRF2; ZNF587; DDX5; TGFB1; TAF6; CTBP1; BRD8; RNF10; SMAD1; CREB3L1; PIAS3; SP3; SMAD2; REPIN1; ING2; FOSB; ZNF131; CERS6; MITF; MED6; NR3C2; EHF; SIX1; CREBL2; INSM1; NFIB; SMARCA1; SMARCA4; BBX; FOXG1; ZNF304; BCLAF1; COPS2; HMGA1; SP110; CHD1; ZBED2; STAT3; HDAC6; ZBTB38; SMARCA5; SMARCD3; ERBB4; DNMT3B; SIAH2; ERG; ZMYM2; ZBTB18; HMGA2; SATB2; NKX2-2; HLF; PAX6; ZSCAN18; ZNF551; HOXC10; HMGB2; ASCL1; TBX3; EMX2; MED1; ELK3; TOX3; HLTF; HES1; ZFP36L1; ZEB2; MSX1; LEF1