Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID60463 Withaferin-a GSE92742 SKB Human 24h 10uM EID0341
Types Number Response transcription factors
Up-regulation 151 PPARG; HOXA5; DLX2; ZNF589; GATA2; BNC1; EGR1; CBX4; ZNF331; FOSB; DDIT3; PRDM2; JUNB; EZH2; ACTL6A; ZBED2; ZNF701; HIC2; CIR1; ATF3; HOXC11; PRDM14; ING4; HMGB1; PRDM1; ZNF266; FOXG1; ZNF141; ZNF415; SALL2; TTF2; ARID5A; ZNF117; SUMO1; EGR4; SOHLH2; ARNTL; INSM1; SNAI1; ZNF195; JUN; FOXF2; VPS72; SMARCA1; SMAD7; HOXC4; TCF7; EGR3; NEUROD1; BARX1; ZIC3; PDLIM1; FOXJ1; KLF7; ZNF177; PFDN5; ZNF273; OLIG2; WDR77; CAMTA2; PAX5; MYCN; MED17; PAX6; LYL1; PNRC1; FOS; NKX3-2; YEATS4; MYBL2; SOX18; CDX2; ZNF557; SSBP3; PCGF3; FOXF1; PHIP; CNOT3; LIN28A; CRYM; ZNF232; HMGA1; NAB2; NR5A2; FOXE1; MAFF; CD3D; HHEX; THRA; FUBP1; NR4A1; SPIB; NR0B1; ZNF124; FEZF2; KLF13; NR4A3; NR4A2; MSX1; CDX1; TGIF1; MEIS2; ZNF91; CREM; KDM5C; HOXA1; ZNF665; TCF7L2; CCNH; TWIST1; BCL11A; DMTF1; VDR; HOXB6; TDP2; PROX1; HOXB2; PSMC3; TRPS1; CALR; SATB2; ZNF432; ID3; MKL2; PBX1; REL; ZNF423; MYB; HOXD1; ID2; KLF10; ERBB4; EGR2; NR1H2; POLR3C; IRF6; TBX3; HAND1; ZMIZ1; NKX2-1; SSBP2; ID4; DACH1; ARID5B; ST18; CDK2; CITED2; HOXC10; ID1; NFATC4; LEF1
Down-regulation 128 PSIP1; USP22; BIRC2; ERBB2; NCOR2; WWC1; WWTR1; FOXJ3; HIF1A; CRK; SMARCC1; MYC; CBFB; IRF2; UBP1; REPIN1; PUF60; SP140L; NFE2L1; COPS2; FOXO3; SMARCA5; WHSC1; TRAK1; MED23; UBE3A; KMT5A; MTDH; NR2F2; SREBF1; ZBTB38; RBBP4; TCF12; NCOR1; BAZ1A; PIAS3; HNRNPD; MAGED1; SIX1; TRRAP; BAZ1B; TP53; SMAD2; HOXA10; LIMD1; CBX3; DNAJC1; AFF1; NCOA4; PBRM1; TBL1X; PRKDC; PPARGC1A; PRPF6; NSD1; HDAC1; SMAD3; TRIM16; TRIM22; MITF; CHD4; NFKBIA; ZBTB24; TBP; IKBKAP; AHR; BAZ2B; EMX2; NRIP1; FLNA; CEBPZ; MBD2; MAF; RBBP5; SMARCA2; KAT6A; CUX1; KAT7; SETD2; ARID4B; RB1; JARID2; TADA3; ZFHX3; BMI1; ZNF512B; ZBTB11; ZNF264; TEAD1; NFIB; SPEN; ZNF148; CEBPD; SIX2; CREB3L1; IFI16; HDAC4; KAT2B; ZEB1; MED24; HMBOX1; KLF6; ZMYND8; RNF10; MED1; THAP11; EDF1; CHD9; BACH1; ATF7IP; CREBL2; CREG1; KDM5D; SP110; HTATIP2; NKX3-1; ZHX2; HES1; RUNX1; NELFB; NRBF2; BBX; CENPF; ZEB2; ABL1; HDAC6; ZFP36L1; TOX3