Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID60058	Farnesol	GSE92742	PHH	Human	24h	10uM	EID0338

Response Information :

Types	Number	Response transcription factors
Up-regulation	100	KDM5A; GATA3; CDX1; HOXD1; RSF1; DMTF1; OVOL2; SHOX; FOXF1; KLF13; CREB3L2; BAZ2A; KDM5D; ZNF124; TFCP2L1; HOXA11; CDX2; SOX3; MYCL; CBX4; SUMO1; USP16; CAMTA2; PAWR; ZNF215; BRWD1; SPIB; HOXB5; NAB2; TOPORS; THAP10; PROX1; KAT2B; CHD3; TULP3; FOXM1; ZNF587; NR1I2; PAXBP1; ZNF224; ATF3; TRPS1; FOXE1; HOXD3; LHX3; ELF3; IRF4; MBD4; ZNF239; GATA1; TAL1; ELF4; SP100; SMAD5; MYBL1; ZNF211; VGLL1; ZNF552; ZBTB20; SATB2; DLX2; NFE2L3; ERBB4; WWP1; PGR; ASCL1; GATA6; TCFL5; NR1D2; HOXB13; ZFP36L1; ZNF611; KLF1; TBX3; PITX2; BTG1; ZNF44; E2F8; NR3C2; NFATC3; NEUROD1; PSMC3; NFAT5; TOX3; HOXB6; ELF5; VPS72; CHD7; ESR1; OLIG2; INSM1; MXI1; IRF6; SMARCA1; NKX2-1; RORA; NR4A2; IL16; MEIS2; ZFPM2
Down-regulation	192	RFX5; RBBP4; MAZ; TRIM27; IRF2; RUVBL2; CBFB; TRIM16; CTCF; DRAP1; NFKBIA; TRIM28; HMGXB4; SREBF2; CAMTA1; HSF2; MAX; EHMT2; RREB1; HSBP1; ZNF165; ORC2; ELK3; RBM14; BMI1; XBP1; PATZ1; ETV5; NCOR2; GABPB1; CEBPA; TSC22D2; ZFP64; PRRX1; HDAC7; TWIST1; HDAC4; ZNF672; RNF14; PCGF1; VEZF1; ATF2; HMGN3; ZFX; CCNC; RNF6; PCBD1; HDAC2; ATF1; CUX1; TCF12; ZNF468; CRY1; DR1; TSC22D1; MYC; ZMIZ1; MAGED1; RNF10; AES; HIVEP2; HMBOX1; NFYC; MTA1; USF2; BCL6; NKX3-1; EMX2; NCOA4; ELF1; BAZ1B; LZTS1; CREG1; ZZZ3; SP3; SMAD3; ERBB2; BCL10; ILF2; RERE; KLF2; TRAK1; MED24; NFE2L1; SMARCA4; JUN; NR4A1; SREBF1; E2F6; REPIN1; SMAD4; KMT2A; ID2; ITGB3BP; GTF2I; DEAF1; ENO1; CBX6; SNW1; CREBZF; TCF25; KAT7; YWHAB; LIMD1; POU5F1B; NEDD8; NR0B1; KAT8; NFIC; ZSCAN18; CEBPZ; CTNNB1; POLR2A; CENPB; C1D; PNRC1; PIAS2; TBP; BCL11B; SIX2; HEY1; ZNF711; HOXA7; ZNF423; PSIP1; TLE1; TRIP6; ZSCAN31; NANOG; ZFP36L2; DNAJC1; ZNF302; ZEB1; AHR; MNT; MYCN; NR1H2; TCERG1; TFEC; MED16; ZNF384; TAF9B; ZNF329; SAP30; PQBP1; MEF2C; SPEN; APEX1; SIX1; HIPK1; FOSL1; SSBP2; ZNF410; HMGA1; ZNF189; KLF10; FOXO3; RBPMS; PAX8; BAZ1A; AEBP1; HOXA5; ARID4B; TP53; MKL2; CREB5; ING2; PEG3; BBX; LEF1; ID4; ID1; NFATC1; DNMT3B; HLF; MAFB; PURA; TCF4; TSC22D3; FOSB; BRD2; WWTR1; TXNIP; SERTAD2; CITED1; TRIM29; SIAH2; KLF4; NR2F2; ZBTB18; MEIS1; CRK