Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID59563	Trichostatin-a	GSE92742	NPC	Human	24h	10uM	EID0334

Response Information :

Types	Number	Response transcription factors
Up-regulation	148	FOS; HMG20B; GTF2A2; CREG1; EED; STAT1; PSMD9; DDIT3; ZSCAN32; TBX21; RELB; KLF6; STAT3; ZNF143; COPS5; ATF3; MYCBP; RUVBL2; NFATC3; NOC2L; IRF3; PAWR; NR1H2; ASCL3; SETD3; TBPL1; SND1; JUND; HINFP; OSR2; HDAC5; CALCOCO1; FEV; ECD; MED31; CDK7; SIRT7; TSG101; SNIP1; GATAD2A; NR4A3; TWIST1; TBP; EDF1; HDAC3; ZNF593; SUPT5H; TBX19; USP16; JUNB; SP140; TFDP2; SUMO1; SMARCD2; PPARD; HBP1; NFRKB; PRPF6; UBE2B; TOX4; ZNF217; SSBP2; EGR3; ETS1; HLTF; TRIP4; CITED2; JUP; GFI1B; NR4A1; CBX7; CREB3L2; TAF12; RFXANK; LYL1; HCFC2; ARNTL; SPIB; CALR; RFC1; OVOL2; CDYL; EGR1; PCGF1; NEDD8; HIVEP2; PITX1; HHEX; TADA3; DBP; NFIC; KMT2A; DNAJC2; MLX; HTATIP2; MTF1; TTF1; CEBPB; BATF3; TRIP6; PAX6; ZBTB7A; SRCAP; PURA; MSX1; NFE2; BRF2; FOSB; TRIP11; RUVBL1; HEY2; ELF3; PPP1R13L; SATB2; NR0B1; TSC22D4; ESR1; DRAP1; TRIB3; TAF10; KLF1; MLXIP; ZNF44; ZNF589; ZNF212; IKBKAP; TGFB1; ITGB3BP; NELFB; IRF6; NR1H3; CTR9; MXD1; PIAS3; SSX1; HDAC1; MNAT1; CD3D; LMCD1; RAD21; FOXD1; TXNIP; TCEA2; IRF7; DMTF1; CRK; FLNA; TOB1
Down-regulation	235	SOX2; HMGN3; NFIL3; HMGA2; MTF2; NR2F6; PHF2; ZNF532; NRIP1; GLI2; SOX11; NFE2L1; PCBD1; MYT1L; TAF9B; PBRM1; USP22; CCNA2; ZNF112; ZBTB38; ZNF248; CBFB; PATZ1; PITX2; LIN28A; SCMH1; RBFOX2; FUBP1; MLLT10; DNMT3B; HES1; ERF; ZMIZ1; ZNF536; DACH1; HIC2; HNRNPD; ZNF189; REPIN1; OLIG2; ZNF32; ZNF606; SUPT7L; HDAC2; ERBB2; TGFB1I1; ID4; MAGED1; ZNF623; TGIF2; MYRF; MEIS2; HMG20A; DDX5; UBE3A; EYA1; NKX3-1; ZNF334; NANOG; PQBP1; RNF138; PHOX2B; BAZ2B; ZNF236; TCF12; ARL2BP; RAN; ZNF12; RXRG; SMAD6; ZNF134; USF2; ZSCAN31; AFF2; PKNOX1; ASCL1; TCF4; HOXC6; FOXJ2; SMARCA4; SOX3; GATA6; ZNF529; E2F3; ZIC3; ZMYND11; ZBTB3; ZEB2; TDRD3; FOXM1; NR2F1; THAP1; TLE4; MEIS1; NCOA4; ZNF24; C1QBP; ZZZ3; WDHD1; BRIP1; RFX7; ZNF467; BCOR; CARF; SUPT3H; PPRC1; ZNF512B; HOXA1; ZBED1; ISL1; NFKB1; ADNP2; FOXN3; ZNF629; ETS2; UBTF; GATA4; NCOR2; HEY1; CREBL2; SALL2; MTDH; POU4F1; LEF1; RBBP4; MECOM; ZFP64; CHD1; SMAD1; CDK8; SMARCD3; ZNF551; ZNF292; NONO; THAP10; HMGB3; DEAF1; SOX17; ZFHX3; ZEB1; ZBED4; HDGF; SMAD4; ST18; HMGB1; GTF3A; ZNF107; TBX3; RCOR3; ZNF768; NUP62; NPM1; ID1; STAT6; IFI16; ZBTB18; CHD7; PPARGC1A; KAT6A; ZMYM2; TAF5L; BCL11A; E2F5; HMGA1; BCL6; CHD4; ZHX2; PKNOX2; PHIP; TRIM22; BAZ1A; EYA2; BACH2; LOXL2; EHMT2; ETV1; TFEC; MYCL; NCOA6; NPAS2; BRD3; KAT2B; MED13; HLX; RBM39; TFAM; ZNF415; GTF2I; TOX3; ATF1; ZBTB1; NLK; MYCN; NCOA1; CARHSP1; LZTS1; TCF21; FOXG1; BMI1; COPS2; ZNF146; SALL1; CLOCK; BIRC2; HIRA; CUX2; YBX3; PBX1; CITED1; APEX1; HLF; FOXO1; TOPORS; ZNF83; SMAD3; SAP30; ZNF423; PLAGL1; ZNF516; TULP3; NFIB; TOX; STAT5B; TGIF1; TAF1D; BASP1; MTA1; CTBP2; BRD2; BNC2; PCGF2; ZBTB20; PBX3; AEBP1; ZSCAN18