Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID58282 Entinostat GSE92742 ASC Human 24h 10uM EID0325
Types Number Response transcription factors
Up-regulation 238 ADRB2; TBX3; KDM5B; SMARCD2; PPARD; DLX5; PCGF2; VEZF1; NKX2-1; FUBP1; SSX1; AES; NCOA1; FOXF2; MED1; NHLH1; ETV1; GATA3; NR4A2; WWC1; KAT2A; CHD7; NEUROD1; INSM1; ZNF467; ATF3; FOXA2; TFAP2C; FOXA1; MNX1; ESRRG; ZNF253; UBE2L3; CDK2; CD3D; GRHL2; ZMYND11; NFE2L3; IKZF5; YY1; ZNF665; RBBP7; NR0B2; CBL; DLX2; TEAD3; SUPT3H; ZNF227; JUN; NR4A1; DACH1; PBXIP1; ZNF235; ZSCAN9; SALL2; SIRT7; NKX3-1; ZNF623; MEIS1; TCF12; CBX7; LMCD1; ZNF711; BAZ2A; PROP1; TAF12; HDAC4; EMX1; DNMT1; TAF4B; CSDC2; ST18; TRIM25; IL16; ERBB4; SPDEF; NEUROD2; DNAJC1; PAX6; ZNF8; CBX2; MAP3K10; SAP130; THRA; PIAS4; BLM; RFXANK; CNBP; SIRT2; PRDM2; EHMT1; ZNF250; TUB; MLXIP; DLX4; BRIP1; CREG1; PRDM10; EN2; SP140; TP73; PRKDC; TOX3; JARID2; CDIP1; MEIS2; ZNF75D; RCOR3; SP1; MGA; TAF9B; OLIG2; KLF11; CBX4; GMNN; MLLT10; TCEA2; FOXF1; MYF6; ZNF510; BRPF1; BCL6; CHAF1B; CREB3L2; SATB2; LHX2; CREBZF; ZBED2; ASH1L; OSR2; ZNF516; PAX5; TRPS1; NR1D2; SUMO1; STAT1; MEF2D; GTF2F1; TRIM24; TRIM32; OVOL1; ZBTB39; MYBL1; SNAI1; ZNF507; AIRE; NAB2; GATAD2A; SOX13; AATF; ZIC3; PIAS1; ZNF611; DBP; RBFOX2; ARID4B; MNDA; ZSCAN32; ZNF331; RBL2; PHF1; RHOA; ZMIZ1; TXNIP; THAP10; MED17; TADA3; NR0B1; AIP; TP63; CARHSP1; NEUROD6; SSBP3; SETDB1; FOXE1; ZNF215; ZFP36L2; MED14; ZFP69B; KLF15; ZHX2; HHEX; INSR; HLF; DDX5; IRF9; TCF7L2; GFI1; ARID5B; HDAC9; APEX1; FOXN3; CBFA2T3; FEV; ID1; RFX5; CBX6; BTF3; PRDM1; ZNF721; CUX1; HSF2; PBX3; CREM; SALL1; SREBF2; RUNX1; TCF7; TGFB1I1; MXI1; SHOX2; PCGF3; WNT4; ZFPM2; FOS; HIPK2; HIC2; TSC22D1; PRRX1; BRCA1; TCF21; NR4A3; ZIC1; ZNF552; MYCL; E2F8; BTG1; PGR; BCL11A; KLF2; GTF2A2; JUND; ID2; NKX2-2; ID4; TOX; SNAI2; HMG20B
Down-regulation 219 RNF141; MEOX2; FOSL1; CEBPA; COPS2; RUVBL2; ERBB2; PREB; HDAC2; TAF10; TRIP6; SUV39H1; STAT6; MYCBP; STAT5A; CALR; TSG101; CCNA2; PPARG; ZNF148; NCOR1; REST; RB1; ATF4; PCBD1; SMARCA5; BATF3; MAGED1; NR1H3; ZNF544; TCF25; IRF2; MED27; ZNF593; ZNF146; C1D; HMGB3; ETS1; LPIN2; ZSCAN12; CEBPG; CENPF; PLAGL1; NFE2L1; CTBP2; PUF60; SOX15; RELA; TP53; ZBTB24; TBP; KLF6; PHF8; RNF10; ZBTB7A; HOXA5; STAT3; BRD8; NANOG; TRIM28; AFF1; ZFHX3; HDAC6; VGLL4; TFAM; TRRAP; ZNF606; GABPB1; ZNF226; SMAD2; ZNF432; SNW1; ERG; NR2F6; ZNF529; TBL1X; FOXO1; SCAND1; PQBP1; TLE4; ZBTB11; ZNF112; ZNF131; DNAJC2; CLOCK; HCFC2; CRK; CTR9; POLR2A; SAP18; PBRM1; THAP4; CCDC59; UBE2I; FOXO3; SREBF1; IRF8; MTDH; CARM1; ELF5; HOXA10; MNT; EGR2; PIR; PSIP1; NFYC; ZNF165; DDIT3; FOXJ3; CBX3; SP3; YBX3; DPF2; POU3F2; ENO1; NUP62; MEF2A; RERE; NLK; ZBED1; ZNF12; ATF1; SETD2; TGIF1; USP22; BAZ1A; RNF14; ZMIZ2; SF1; HOXA1; ZNF350; NRBF2; PTRF; FOXC1; KDM5D; SP100; ADNP; MAFF; BNC2; TFCP2L1; CEBPZ; RBM14; LIN28A; ZNF22; MED7; HOXB6; HOXD1; KLF5; SAP30; SMAD3; ZFHX4; RLF; BCLAF1; MED20; ZNF23; JUP; KLF4; PIAS2; SPEN; CREBL2; CTNNB1; NFATC3; HOXB2; C1QBP; CBX5; HOXC6; NFIL3; SOX17; PHF20; HOXB7; ZBTB1; ZNF302; RUNX3; BBX; SIAH2; MYB; POU5F1B; ZZZ3; RNF6; FOXJ1; IKBKAP; ZFP36L1; EGR4; CBFB; MSX1; RYBP; BCL10; IRX4; ELK3; ING3; ZNF423; TCF4; SFPQ; XBP1; HMGA1; TWIST1; TSC22D2; MEOX1; SMAD7; EYA2; TERF2; WWTR1; FHL2; TRIM22; NFIB; DNMT3B; HMGN3; SMARCA2; TERF1; EHF; ZBTB38; BASP1; CCNC; HOXC10; KAT6B; ECD; MECOM; ATF5; FOSB