Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID57753 Entinostat GSE92742 NPC Human 24h 10uM EID0319
Types Number Response transcription factors
Up-regulation 172 SOX4; CCNH; HOXA10; MEF2C; TAF4B; HOXC10; JUN; ZBTB43; NR4A2; TEAD4; SATB2; CREBL2; ECD; ZNF217; CREG1; NKRF; BRD2; SNAI2; CDX1; CAMTA1; ERBB2; LMCD1; LIMD1; NHLH2; ZFHX3; TAF5L; TCF20; SNAPC4; TULP4; NFAT5; CDK8; CREB3L2; EHF; NFKBIB; IRF2; RAD21; ZNF331; ARNT2; PRDM2; THRB; CRYM; ETV5; JUP; TSC22D1; PNRC1; TERF1; HOXD1; BAZ2A; ZNF124; ZNF175; OSR2; CDC5L; RYBP; SAP18; PDLIM1; FOXN3; TFAM; HIF1A; RERE; NPM1; MTF2; TLE1; LHX6; HEY1; PSPC1; ETV6; HMGB1; TFCP2L1; CREB5; SIN3B; BNC2; NR4A3; SUPT3H; SOHLH2; CREM; NCOA3; PRRX1; EN1; ING3; TP63; HIVEP2; TAF12; RBFOX2; ZNF562; HES1; ZNF816; IRF9; ZNF536; RBPMS; RUNX3; ELF1; GATA2; FHL2; PKNOX2; VDR; NR5A2; NR4A1; HIPK1; BRD4; MXI1; SMAD2; NEUROD1; STAT3; AHR; TCF7L2; TRPS1; BBX; MED17; TRIB3; EMX2; TFAP2A; HMGN3; GMNN; CITED1; ATN1; KLF4; KLF2; BCL10; PAWR; PCGF3; ZFP36L1; ELF5; TRIM22; PHF1; JUND; CHD4; E2F5; NR1D2; HDAC9; ARID1A; MED14; MED1; RBL2; NANOG; ZNF264; MYBL1; MBD2; INSM1; TCF7L1; PHOX2B; ST18; CTBP2; SPIB; SMAD7; MNAT1; ZBTB38; WWTR1; RORA; SOX9; SMAD1; DLX5; FOSB; ZNF12; ATF3; TXNIP; BACH2; TOX3; WT1; HDAC1; YBX3; TFAP2C; CHD7; ID1; NFKB2; LITAF; POU2AF1; DNMT1; ERBB4; ZMIZ1; MAFB; NR2F1; KAT6A
Down-regulation 201 BRCA1; NFIL3; CCNA2; DRAP1; RHOA; TBP; TBPL1; BCLAF1; CARM1; SUV39H1; BMI1; HOXB2; VPS72; E2F2; PSMC3IP; MXD3; SUPT4H1; ZNF764; ZNF302; MYCBP; PITX1; KAT6B; ZNF32; ZNF688; SUB1; MAGED1; ZNF23; NFKBIA; MYBL2; ZNF189; NUP62; DEK; BATF3; ZBTB1; NR0B1; ZNF672; RBM14; TFDP1; SIAH2; WDHD1; KLF1; RNF10; NFATC3; FOXM1; BRD3; ETS1; ZNF629; ZNF516; BRPF1; ZNF614; RNF141; ZBED1; MBD3; MED24; KMT2B; KAT7; TCF12; MED25; MED23; C1QBP; ZNF273; ELK1; CHD3; CRK; MED7; ZNF576; VEZF1; ERCC3; BLM; PREB; ZNF652; ZFHX4; BRD7; TRRAP; BIRC2; WHSC1; ZNF334; POLR3F; FLNA; TGFB1I1; SP1; NPAT; ASCL1; ZSCAN12; YY1; TBX3; SMAD3; TCEA2; NELFB; MYB; TTF1; RBBP7; HOXB5; ZNF84; HDGF; PLAG1; ZNF711; TCF21; NFE2; CNOT6; DDX5; TP53; SMARCE1; NR2F2; ZNF232; SUPT7L; ZKSCAN7; SOX11; MNT; HOXB6; FOSL2; ZBTB48; NCOA1; STAT6; CUX2; TCF4; STAT5B; SFMBT1; HMGB2; ZKSCAN1; ZNF85; ZNF83; PBX2; CHAF1B; THAP4; SAP30; ATF5; GATA4; HNRNPD; BRIP1; ZNF107; DNAJC1; CENPB; LEF1; NCOA4; NR1H3; BRD8; TDP2; PRRX2; HMGA2; MAZ; ID4; TRIM16; CCDC59; CARHSP1; FOXE1; HHEX; PAXBP1; KLF3; EGR2; MEOX2; TAF11; MED6; SCAND1; PIAS3; ZNF268; BCL11B; CCNE1; SMARCA4; NKX2-2; NKX3-1; ZNF721; CREBZF; MYCL; HTATIP2; KDM2A; CEBPZ; ZNF131; CBFB; EGR1; IFI16; ZBTB18; ZNF468; SLC2A4RG; FOSL1; EGR3; TFEC; AEBP1; SREBF1; MAF; ZNF44; ESR1; ZBTB16; FOXF1; TCERG1; TBL1XR1; HOXB13; ZNF43; MYCN; ZNF274; MEIS1; ZNF160; ZEB2; MSX1; ZNF586; BHLHE40; SMAD6; MNDA; THAP11; CEBPA; PUF60