Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID57612 Apicidin GSE92742 NEU Human 24h 10uM EID0315
Types Number Response transcription factors
Up-regulation 288 BRCA1; RELB; ECD; CREG1; TLE2; HHEX; DAXX; MNAT1; TAF5L; EHF; ZNF45; MBD1; SRF; CREM; CDK2; NFE2L3; IRF4; CREB1; CBX6; ZNF557; NR2F6; NPM1; ZNF276; LHX1; ZNF696; JAK2; HOXA6; THAP1; MYBL2; HES1; AR; CNOT6; SIRT7; TAL1; TFAP2C; NFYA; PPP1R13L; TAF11; ATF3; TRIP4; IFI16; SSX3; SUB1; ACTL6A; WHSC1L1; FOXE1; SIN3B; XBP1; HOXD9; DNAJC2; ESRRA; ARNTL2; ZNF235; ZBTB40; BCLAF1; RNF6; RBL1; TRIP6; MLLT10; EGR1; SIAH2; NR1I3; ZNF408; HOXA10; ZNF768; RREB1; ZBTB39; DDX54; STAT1; RING1; ZNF180; HMG20B; NKX6-1; ZNF3; STAT2; IRF1; FOS; TFAP2A; FOXA2; SSX1; TFE3; SIX1; MYCL; NFE2L2; ZSCAN2; ZNF394; PRDM1; TRIM22; PTTG1; MED21; E2F4; POLR3C; MBD3; KDM4C; NFYB; IRF3; TAF6; USP16; TEAD3; ZNF571; YEATS4; MXD1; TBX3; ETV4; NR4A2; SIX2; NELFB; JUNB; TEAD4; BNC2; TFDP2; ZXDC; CTCF; GATA4; SOX10; NSD1; TFDP3; ZNF467; MNX1; ANKRD1; ZNF227; HOXC10; ZNF224; BCL3; MYBBP1A; ESR1; BCL6; TAF1C; ZNF350; RBBP8; E2F8; NR2F1; ZNF576; NR1D2; NR0B1; DACH1; SOX13; HOXA1; ZBTB1; RFX5; POLR3F; PREB; NFIL3; FOSL1; GTF2F1; CBX7; IRF9; IRF7; ABT1; NR1H2; SP100; THAP10; MAML1; POU4F1; LZTR1; HLX; PIAS3; OSR2; MAFK; ETV5; ZNF14; PRMT2; UBP1; ZNF155; ASH2L; ZNF654; REL; HTATIP2; ATF6; NOC2L; ZNF274; SIX5; FOXJ2; JUN; CD3D; ARID5B; MITF; PBXIP1; AES; IRF5; C1D; KLF6; MGA; TRAF6; FOSB; TRIM25; MXD4; RBL2; SUMO1; CIR1; ZNF146; NCOA1; HOXC13; VGLL1; TAF4B; ELK3; NFIC; SLC2A4RG; MYF6; ZBED2; SFPQ; GTF2I; ARL2BP; PAX8; GTF2A2; BHLHE41; SALL1; MED6; ZNF107; ZNF133; PURA; NCOR1; HOXA5; FOSL2; PSMC3IP; ZNF184; PIAS1; RNF14; SERTAD2; SMARCE1; KLF13; PGR; EYA2; DEAF1; SSBP2; TDRD3; RUNX3; MYT1; EGR3; ZNF12; SOX18; POU2AF1; RELA; TRIM32; MXI1; MNDA; FLI1; MSC; HLF; SNW1; ERF; ORC2; STAT4; ELF1; NEUROD1; BACH2; OVOL2; NKX3-1; EN2; TULP3; EGR2; TADA3; KLF5; NR3C2; WWC1; TGFB1I1; CEBPD; ZBTB16; HOXB5; PSMC3; NFKB2; DMTF1; IL16; ZBTB38; IRF8; KAT2B; LOXL2; FOXF2; SPDEF; THAP11; ZNF266; KLF4; NFIB; TCEA1; WT1; ZFPM2; ENO1; MYBL1; VDR; YBX3; SNAI2; ID1; TCEA2; TOB1; TXNIP; SMAD3; ETS1; CRK
Down-regulation 305 ZMIZ1; ZNF91; PUF60; HIF1A; PLAGL1; USP22; CBX5; SMARCA4; TCEB2; NUP62; UBE2I; RUVBL1; ABL1; ZFHX4; MAZ; TLE1; SMARCB1; CAMTA1; SOX11; EZH2; PHF20; SIM1; SAP30; BIRC2; SMARCA5; HSF2; TSC22D2; TLE4; NHLH2; PCGF2; PSIP1; FOXG1; TOX3; E2F2; LITAF; FOXK2; HDAC2; CHD4; ZNF83; MNT; RBBP4; CREB5; INSM1; PIAS2; PITX2; TBPL1; CHD8; FOXO3; BAZ2B; CARF; SOX9; TRIM28; EMX2; HMGB3; BTG1; NONO; TCF7L1; MED23; E2F5; ZNF292; POU3F2; PEX2; PFDN5; SOX2; PHOX2B; XRCC6; STAT6; NFAT5; MED27; LYL1; ATF2; ARID4A; HAND1; HEY1; ZNF165; L3MBTL1; CIZ1; ZFP36L2; PPRC1; NCOR2; APEX1; NCOA6; KAT8; FOXD1; TAF4; LEF1; TCF25; KMT2A; NFE2L1; DPF2; TAF9B; ST18; PRRX2; GTF2IRD1; ZNF174; MTA1; ASXL1; ZNF771; DLX5; MTF2; NR2F2; MED12; NKX3-2; UBE2B; BRD3; RBBP7; SAFB; TOX; MTDH; ID4; SCAND1; HMGB2; NR2E1; ELF4; SALL2; SPI1; ZNF93; PATZ1; ZNF200; TCF7; RRN3; GMEB2; ZNF629; HIVEP2; ZNF468; FUBP1; RFC1; BRD8; RBBP5; MMS19; ZNF358; GTF3A; SAP130; KLF10; ARID3B; EP400; TFEB; JARID2; ZNF665; ZNF24; MED13; TCERG1; E2F3; TWIST1; WWTR1; CARHSP1; FHL5; ZKSCAN7; RYBP; BAZ1A; TAF12; TCF12; NCOA2; NLK; BASP1; ZNF177; EYA1; BAZ1B; ZNF423; BCL11B; ZNF667; PQBP1; MEOX2; LDB1; MKL2; ASCL1; ZNF426; CDK7; ZNF532; TADA2A; AGO2; RAD21; RLF; ZNF835; DLX2; ZEB2; CCNC; ZNF593; TCF7L2; ZHX2; SMARCC1; HIPK2; EDF1; ARID5A; DDIT3; ZFHX3; SAFB2; ISL1; RCOR1; TAF1D; TSC22D1; RUVBL2; DDX5; SP2; ZNF711; CDC5L; PAX5; BCL10; PSPC1; MBD4; NRBF2; CHD7; ZNF675; RARA; YAP1; MED15; ZBTB20; KDM5B; SUV39H1; HIC2; TBX2; SMAD1; TBL1XR1; NR1H4; PLAG1; INSR; ZNF419; CITED2; STAT5A; CBX3; COPS5; SCMH1; MYCBP; CHD1; TRPS1; SOX3; ENY2; TAF9; HMGN3; ZNF135; NFATC4; MECOM; MED24; SUPT5H; ELF5; PBX3; PNRC1; BCOR; BMI1; BRIP1; ZNF589; MYRF; RAN; ZNF606; SPIB; TCF21; MAGED1; ERBB2; SOX5; CCNA2; NCOA4; RBPJ; BTAF1; CRY1; MYT1L; ZNF32; NFE2; FOXF1; MSX1; KDM2A; PROX1; PEG3; SATB2; ARID4B; MAFB; ZNF302; PRKDC; JUP; TP53; KDM5A; ZNF415; VPS72; NANOG; BAZ2A; TAF10; ZEB1; TGFB1; YBX1; VGLL4; ZFP36L1; GATA6; ZNF611; HEY2; DNAJC1; ZNF264; FOXO1; ING2; PRRX1; ZNF160; HOXB6; STAT5B; SMARCD3; ZNF331; HOXD1; HDAC9; ID3; ZBTB18; NAB1; BHLHE40; HOXC6; SUZ12; NFATC3; MAF; FOXO4; NFKBIB