Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID57600	Trichostatin-a	GSE92742	HA1E	Human	6h	10uM	EID0314

Response Information :

Types	Number	Response transcription factors
Up-regulation	139	NR4A2; CALCOCO1; HLX; PBXIP1; NOC2L; JUNB; NKRF; IRF6; POU4F1; SUMO1; TAF1C; AHR; PRDM2; RING1; CALR; THAP7; ING4; ZNF195; AEBP1; TBPL1; CCNH; KLF11; FLI1; MYCL; NR4A3; ZNF394; HDAC5; CUX2; SPIB; BCL11A; ECD; SATB1; PNRC1; SREBF2; DDIT3; ZNF124; IRF9; NR4A1; CBX4; THRA; HSBP1; HIPK1; FOS; KDM4C; NFIL3; TOX; TERF1; ZNF331; CEBPD; CITED2; TGFB1; NONO; ZNF281; SIRT7; ISL1; MYBL1; NFKB2; HOXD1; CDK7; BACH2; PAX5; ZNF443; JUP; ZNF117; CBFA2T3; CREM; SSBP2; NCOA3; MXI1; ZNF354A; PFDN5; ELF2; CAMTA1; NR0B2; CERS4; SOX11; PHF1; ACTL6A; C1D; ERBB4; CREBL2; GATA6; PEG3; ATF3; ZBTB17; NR1H2; HHEX; SRCAP; HBP1; NAB2; ERCC3; YEATS2; RAD21; TOB1; MED23; TCEA1; CEBPB; IKBKAP; HIC2; RCOR1; HMGN3; IRF7; ZNF266; MED15; ELF3; TRIM22; ZBTB18; FOXF2; ZNF12; RUVBL2; SMARCD3; JUND; ARID1A; ZNF165; KLF7; LEF1; TBX3; SSX1; SSBP3; XBP1; ATF4; GRHL2; ETS2; MEIS1; DAXX; XRCC6; TOX3; NFATC4; MYRF; STAT1; MEIS2; HMGB2; TLE1; MTF2; RBBP8; TGIF1; YBX3; TCF4; PSIP1
Down-regulation	155	ERBB2; TP53; SUV39H1; GABPB1; NUP62; FOSL1; ZBTB20; KDM2A; TRIP6; FOXL2; CCNA2; NFKB1; GATAD2A; SMARCC1; HNRNPD; NCOR2; KMT2A; HDGF; NR2F6; TRRAP; BMI1; FHL2; HMG20B; HOXA10; TCERG1; MAFB; NCOR1; CIZ1; PAX8; EMX2; WHSC1; RBM14; REST; NR1I2; NCOA6; USP22; ADNP; ING2; SERTAD2; STAT5A; SNAI2; HDAC6; ATF1; TRIM16; TSC22D2; ZNF652; RREB1; NFKBIA; MSX1; ATF6; USF2; ZNF282; ELK1; RELA; BAZ1B; PIAS2; BRD3; ZBTB38; SMARCD2; KDM5B; SF1; AATF; NKX3-1; ZHX3; ZNF226; SIM2; CARM1; NFIB; CREB3L1; MYBBP1A; ZHX2; BRPF1; PTRF; ZNF148; KLF5; HOXA11; ZNF532; ZBTB16; IRX5; PPRC1; PSMC3IP; MED1; PMF1; BHLHE40; CDYL; ZNF721; SMARCA2; RFX7; RXRA; ZNF629; ABL1; POLR2A; MECP2; TBL1XR1; ZFP64; ZNF512B; CHD7; E2F3; CREB3L2; PRRX1; NR2F2; ZNF160; ZNF768; SMARCA4; TFEC; ZIC1; CBFB; KLF4; EDF1; SMAD3; ING3; ESR1; TCF12; ELF5; SALL1; SETD2; FOXD1; HOXA5; KLF6; BAZ1A; ZEB2; HOXC6; GTF2IRD1; ZNF587; BIRC2; TFAP2C; ZNF329; HMG20A; PITX1; MYC; EED; SKI; PATZ1; FLNA; MECOM; GATA3; ID1; NCOA2; FOXO3; RUNX3; EGR2; HOXC10; SCAND1; STAT3; ZNF586; FOXC1; MAF; ATF5; STAT5B; PUF60; WWTR1; SOX10; SOX9; NR1H3; PPARG