Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID57185	Vorinostat	GSE92742	SKB	Human	24h	10uM	EID0304

Response Information :

Types	Number	Response transcription factors
Up-regulation	389	GTF2A2; NFE2L2; TFAP2A; DRAP1; TADA3; RUVBL1; SMARCA5; RFXANK; ATF6; CREB3; ARNT2; GMNN; TRIM16; RHOA; SIX2; PARP1; FOXK2; SREBF1; ENY2; XRCC6; RBFOX2; CTR9; SMARCD3; CDC5L; PMF1; ILF2; ARID1A; SSRP1; TAF6; PFDN5; CCNH; TCEB2; SETD3; LZTR1; TFDP1; YEATS2; AIP; TCEA2; VPS72; SUPT4H1; SREBF2; JUN; BRD7; ZFHX4; STAT5B; SHOX2; DEK; NAB1; GTF2A1; PRPF6; NOC2L; CBFB; ZNF692; RBBP8; UBE2L3; SMARCA1; FOXO3; RNF141; PSMC3; HDGF; ASXL1; RXRB; MDFI; KAT2A; HIF1A; HLTF; MLX; COPS5; HMGB1; DPF2; HDAC5; PA2G4; SOX9; TCF25; HOXB3; BRF2; BACH2; TSG101; HDAC1; ZNF133; HEY1; SMARCB1; RING1; SP100; GTF2F1; RUVBL2; MITF; MNT; JUND; ZNF580; ZHX3; MYCBP; HLX; NFIL3; SUB1; SAFB; PCGF1; MED20; NFIX; TULP3; ETV5; NKX3-2; RELA; PBX1; PSMD9; GLI3; SOX2; ARHGAP35; HMG20B; ZNF593; LDB1; MEN1; THRAP3; PIAS3; TBL1X; ATF3; TLE2; LOXL2; PHF20; SMARCC1; E2F6; ZBTB18; ZFP36L1; RBM39; MTDH; ZBTB17; USP21; YBX1; TSHZ2; PCGF2; MYC; WIZ; SIN3B; CDIP1; HDAC9; SUMO1; NEDD8; INSR; MED16; RUNX3; AES; TAF10; RBPJ; ZNF358; PEX14; CREM; KDM5D; ELK1; HOXA11; TCEA1; CBX6; TCF20; CCNE1; THRA; HAND1; CDK7; DEAF1; MED13; CALR; PCBD1; MXI1; VEZF1; RERE; HIF3A; PREB; ZNF816; NELFB; CHD8; PIR; TOX4; STAT2; RNF10; SND1; PCGF3; TRAK1; SOX12; MDM2; MTF1; ZNF232; ERCC3; SETD2; PPARD; ZNF195; ZNF286A; ITGB3BP; RYBP; SP3; NCOA3; HOXB2; AHR; ETV4; STAT3; EHMT2; SUZ12; HIPK2; HDAC7; ABT1; SMARCE1; TGFB1; TSC22D1; MYRF; ELF3; TRIM28; MMS19; MXD3; HDAC2; ENO1; SIRT2; NSD1; MEIS1; MECOM; MED24; ZNF415; CREBL2; NR2F6; DLX5; DMTF1; BTF3; WDR77; PBX2; PRRX2; TWIST1; TRIP6; CITED1; RUNX1; BAZ1B; NONO; PTTG1; CRK; TAF1D; CREG1; AATF; ATN1; MSX1; TOB1; UBE2I; MED15; CTNNB1; TLE1; DDX17; TEAD1; PSIP1; CNOT2; PHF1; CEBPB; THAP11; TCF12; ZNF331; E2F3; APEX1; NR0B2; CDK8; COPS2; GTF2IRD1; EDF1; SMARCD2; ERCC2; NCOR1; SUPT6H; MAFG; FOXD1; TULP4; TSC22D3; POLR3C; IRF7; KLF11; CSDE1; THAP7; RBBP4; YBX3; DR1; RFC1; MEIS2; ETS1; ZNF528; PRKDC; PITX1; GATAD2A; PKNOX2; CARM1; CALCOCO1; SERTAD2; ZNF281; ZNF83; HBP1; TBPL1; ZNF205; TAF7; ZBTB38; RAN; ZMYM2; RARG; ZNF768; EHF; ASH2L; ZNF544; ZBED2; VDR; IRF9; DNAJC2; SALL2; TSC22D4; RBBP7; SAFB2; MED21; ESRRG; HDAC6; HHEX; HOXB6; BCL6; TCF4; CERS6; CTBP1; TCERG1; PBXIP1; GTF3A; BCL3; PEG3; KLF7; ECD; BRD4; WWC1; NFIC; HDAC3; NAB2; TAF9; TRIM27; CNOT6; BANP; TRIB3; NKRF; VGLL4; ACTL6A; CERS4; CHD4; TGIF1; SUPT5H; HOXD1; IFI16; MBD2; GMEB2; C1QBP; CBX3; CREB3L2; HMGN3; SNAI2; FUBP1; SP110; NCOA6; DDIT3; ZNF410; RB1; ZNF688; ZNF512B; CDK9; ZNF302; HTATIP2; BIRC2; LITAF; ZNF611; CDK2; ZIC1; NPM1; TRIM29; EMX2; CCNC; MKL2; THAP4; FOSB; TCF7L1; ELK3; TSC22D2; YWHAB; ISL1; NFE2L1; ZBED1; KDM5B; CEBPG; ST18; SCAND1; RXRA; HOXA5; SLC2A4RG; ATF5; USP22; CTBP2; HOXB7; PBX3; CITED2
Down-regulation	477	ZNF180; MYB; ZNF764; HOXC4; ZNF227; ZNF112; IRX5; UBE3A; BCL11B; KLF2; NFX1; LHX6; CSDC2; BRWD1; OVOL1; ZEB2; ZNF124; GATA6; ZNF7; GATA3; ING1; ZNF254; ZNF493; RREB1; IKZF1; EN2; ZNF510; FHL5; ZNF556; ZBTB43; SPIB; SOX21; ZNF236; ZNF257; ING3; MYT1L; VGLL1; ID4; NRBF2; ZNF551; NKX2-1; ZSCAN16; BRCA2; ZNF222; ZNF267; KLF10; PRDM1; ZNF589; LHX1; ZNF85; ZNF506; MNAT1; SSX1; NANOG; ZBTB3; TFCP2L1; SUV39H1; ARNTL2; ZNF350; EP300; ZNF304; ZNF22; WWP1; ZNF189; ZNF473; BACH1; ZNF695; ZBTB6; E2F2; ZNF34; ZBTB44; ZNF696; ZNF770; TCF21; ZNF33B; GRHL2; BRIP1; ZNF234; ZNF682; TAF1A; ZNF84; ZNF573; ZNF586; NR1D2; GCM1; IRF5; ERG; FOXE1; LIMD1; SHOX; TOX3; BCLAF1; FOXH1; MLLT10; NR3C1; DBP; TBX21; HESX1; ATOH1; PAWR; CREBZF; SMAD6; YAF2; NR5A1; TOPORS; EGR2; THAP9; PPARG; BAZ2B; FOXI1; ZNF557; ZNF140; SSX3; BATF; SNAPC4; BCOR; ZNF813; LEF1; PAX1; ZNF711; PAX7; ETS2; TTF1; MYF6; ZNF239; SKI; ZNF200; ZNF93; ZSCAN2; ELF2; PRDM14; PSPC1; PITX3; INSM1; ZFP2; LHX3; ZNF10; CDX4; ZNF443; PITX2; ZNF16; PRDM10; MAPK8IP1; TRIM24; ZNF223; ARRB1; LMCD1; ZNF134; NEUROG3; ZNF292; BLZF1; NEUROD1; POU2F3; FOXJ1; JAK2; EGR3; ARID3B; GATA2; HLF; TMF1; ZNF614; KDM4A; ZNF423; PGR; HOXA1; GFI1; ZNF623; RFX1; ZNF442; ZNF75D; POU3F3; HOXC5; ZNF45; HOXC13; RCOR3; ZNF710; ZNF571; NR5A2; TFAP2B; SOX18; HOXD13; CHD7; ELF4; GABPA; ZNF235; TFDP3; ZNF329; TAL1; RXRG; SOX3; ZNF391; KDM5A; HMGB2; IKZF4; MED14; KMT2D; ZNF8; HMG20A; ZFX; ZNF253; FOXN1; CHAF1B; PHF2; TLE4; TAF1; PRDM5; ESRRB; HOXB8; MEF2A; HDAC4; FOXD3; EP400; OVOL2; RELB; ZNF174; ZNF208; POU4F1; BNC1; NEUROD2; ZNF157; DOT1L; WDHD1; ZNF426; CHD2; LYL1; ZNF225; MTA2; BMI1; DACH1; NCOA1; ZNF107; FEV; HNF4A; NKX2-2; KLF4; TBX2; ZNF550; FOXJ2; MED1; PSMC3IP; GSC2; ZFP64; ZNF250; SNAI1; PHF8; MZF1; REXO4; NKX2-8; IKZF5; HSF1; NFATC3; HOXC6; CCNA2; SPI1; ZNF516; CIR1; ZNF202; HOXC8; ZNF778; NEUROG2; HES2; EBF2; JARID2; TEAD4; ETV3; EGR4; MECP2; SIX6; MAFB; ELF1; ZBTB25; NFATC1; SATB1; OLIG2; NFYB; DNAJC1; CARHSP1; KLF1; ZNF440; ZNF142; ZFP30; CIITA; PATZ1; RFX7; IRF1; SCAI; IRF4; ZNF468; SOHLH2; NHLH1; ZNF43; CDX1; ZBTB24; SRY; ZBTB14; DCC; ATF1; SMAD7; TXNIP; NR3C2; KDM5C; KAT6B; HOXC10; ZMYND11; ZNF446; NKX2-5; DYRK1B; ORC2; SFPQ; TBX3; CAPN15; TCF7; EWSR1; PML; PKNOX1; MYCL; SUV39H2; AGO2; POU2F1; ZNF529; HMGA2; CBX2; UTF1; GMEB1; HOXD12; TAF7L; ZNF613; AFF1; ASCL2; RBL1; TGS1; PRDM12; HDAC11; PIAS1; NRL; EMX1; ZNF14; ZNF430; BPTF; ZNF175; NPAS1; HOXA3; KLF5; MED17; MAP3K10; MEOX2; NR1I2; FOXL2; BAZ1A; HNF4G; SCRT1; ZNF419; REPIN1; ZNF184; ZNF226; KAT7; SALL1; SIAH2; ZNF91; ZFP69B; HIC1; KLF13; MAK; BLM; POU2AF1; TCFL5; LHX2; AFF2; TRIM33; SKIL; CREB1; SOX5; DDX54; IRF2; ZKSCAN4; ING2; ARID3A; PPARGC1A; JUP; ATF6B; ASCL1; ZNF217; HEY2; ZKSCAN3; ARID4A; DAXX; OSR2; REST; JUNB; KMT2A; HOXB13; ZNF667; ZFP36L2; MED7; PROX1; FOXA1; PDLIM1; ZNF177; ZHX2; SATB2; FOSL1; FOXA2; CREB3L1; IRF8; ZNF211; SOX13; ZNF345; THAP1; PRDM4; BARX1; ZNF264; EGR1; NPAT; ZNF671; DLX2; MDM4; HOXD3; HIVEP1; TDRD3; HES1; FOXN3; NRIP1; NR4A1; ERF; ZBTB16; ZNF143; TFEC; BASP1; SMAD4; SMARCA2; IL16; ZSCAN32; DNMT3B; CBX4; E2F8; NR2F2; PHIP; TBL1XR1; REL; BRCA1; CBFA2T3; RRN3; TP63; CDX2; ZBTB20; YEATS4; THAP10; CHD1; NKX3-1; NFRKB; PRRX1; ID1; RNF6; PAX5; BHLHE41; MTF2; CREB5; TAF9B; NFE2L3; BTG1; SPEN; NFKB2; RNF14; TGFB1I1; ZNF721; RNF138; CRY1; CBX7; STAT6; TOX; MNDA; SOX11; NFE2; NR1H2; KLF9; ETV1; HIRA