Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID57078	Trichostatin-a	GSE92742	NPC	Human	24h	10uM	EID0300

Response Information :

Types	Number	Response transcription factors
Up-regulation	128	CREG1; EGR1; DRAP1; FOSB; MLXIP; FOS; GTF2A2; PHF1; RUVBL2; RUNX3; PPARD; NR4A1; ZNF593; BRF2; RUVBL1; NOC2L; SP100; IL16; FOXO4; RELB; CALCOCO1; STAT1; SIRT7; ZNF324; ZNF394; LHX6; LYL1; JUN; ZNF224; SUPT4H1; CCNT1; JUNB; ETV6; HDAC5; ZSCAN32; ZNF331; CBX7; SPIB; MYCBP; HMG20B; COPS5; ATF3; SNIP1; HHEX; MBD2; SND1; PSMD9; BRD4; HMGXB3; PIAS1; ZNF721; HDAC1; NFIC; IRF3; PFDN5; NR4A3; NFATC1; GTF2F1; TCEB2; ARNTL; MED15; NR3C2; BBX; TOB1; TAF4B; SP110; BHLHE41; NR0B2; TSG101; BCL3; CREM; YWHAB; ZNF160; SATB2; NR4A2; IRF7; MXI1; EVX1; ASH2L; UBE2B; USP16; PRPF6; SERTAD2; ELF3; ECD; TBP; CRK; SSBP2; MTF1; BRD2; CTR9; KLF1; KDM4C; TAF12; HLTF; DDIT3; PURA; CDK7; HIVEP2; MLX; KLF6; CRYM; KLF2; JUND; CITED1; TBPL1; IKZF1; TFCP2L1; SETD3; TCF7; LMCD1; HBP1; TSC22D2; CD3D; CBFA2T3; NFE2; PITX1; SMARCA2; CITED2; ETV5; FOXC1; HTATIP2; MYBL1; MSX1; FOXD1; SIX1; ZBTB18; CEBPD
Down-regulation	233	SOX2; HMGA2; CUX2; PCBD1; TP53; NCOR1; ADNP; ZBED1; PATZ1; STAT6; SOX11; HNRNPD; ERBB2; ZNF532; HDAC2; BRIP1; TCF12; VGLL4; SMARCA4; PHF2; BAZ1A; CBFB; NCOA2; ZFP69B; E2F3; LIN28A; PMF1; FOXM1; NUP62; ID4; ETV1; ZFP36L1; PMS1; EZH2; ZMIZ1; USP22; PITX2; TLE1; ZNF146; PLAGL2; EED; ZKSCAN7; CDK8; HMGB3; ZNF22; ZNF282; HDGF; SALL1; NAB1; CBX5; GLI2; HES1; BRCA2; EGR2; ZIC3; LEF1; PBRM1; SMARCE1; ZNF32; ZFX; ZMYM2; IFI16; PARP1; RFX7; ZNF302; DEK; TBL1XR1; ZMYND11; BRD3; BAZ2B; RSF1; ZNF74; DPF2; BACH1; RBFOX2; SMARCC1; MYCN; YEATS2; CARHSP1; ZFP30; CHD9; ZNF334; ZBED4; PKNOX1; ZNF292; APEX1; BPTF; TAF9B; MEIS1; NRIP1; ZFP64; WIZ; FOSL2; WDHD1; MAGED1; NFKBIA; ZHX2; TRRAP; ZNF84; ZNF273; PQBP1; HOXB9; CHD3; HIC2; ID3; ZFPM2; ATN1; MLLT10; AEBP1; PBX1; TRIM22; BAZ1B; ZNF189; ASXL1; BCL6; SMAD4; ZBTB1; ETS2; SP3; FOXO1; DEAF1; MAFB; TFDP1; ZEB1; NONO; ENO1; CNOT1; YEATS4; SCMH1; NFYB; DMTF1; TBL1X; RNF138; MNT; ZNF232; CTCF; RAN; TCF7L2; SALL2; ATF1; ZNF124; ZNF140; ZNF512B; PCGF3; PRMT2; GTF2IRD1; TLE4; TOX3; NFKB1; ABL1; NR1I2; EYA1; DDX5; CENPB; ZEB2; RNF111; SMAD6; CTNNB1; ZNF529; TCERG1; CBX3; VPS72; NEUROD1; CCNA2; HMGN3; ASCL1; HMGB2; ZNF112; SOHLH2; PBX3; HIRA; FOXN3; MYC; FUBP1; HMGB1; NFE2L1; HDAC9; ZNF43; NCOR2; ISL1; YAP1; SAP30; E2F5; ELF4; ARL2BP; TGFB1I1; FLNA; ZNF248; ZNF423; PLAGL1; XBP1; REPIN1; GABPB1; TRIM24; BCOR; GATA6; CENPF; REST; TCF7L1; BRD7; PAX6; LZTS1; MECOM; PCGF2; BMI1; RXRA; DNMT3B; AR; BASP1; RBBP4; NR2F2; BCL11A; SMAD2; HIPK3; EMX2; ZNF415; MTA1; PHF20; ZNF131; SOX17; ZIC1; SMAD7; ZFP36L2; DACH1; HOXB2; HOXB6; ST18; NR2F1; HEY1; MEIS2; MYRF; HOXC6; NR2F6