Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID57011	Trichostatin-a	GSE92742	NEU	Human	24h	10uM	EID0297

Response Information :

Types	Number	Response transcription factors
Up-regulation	121	FOS; GTF2A2; CREG1; EGR1; PPARD; ZNF331; CCNH; CREM; ADRB2; UBE2B; CEBPB; FOXF2; HOXC10; CALCOCO1; SIM2; SPIB; RUVBL1; ACTL6A; HMG20B; JUNB; IRF3; RELA; TCFL5; ZNF205; ZSCAN32; FOSB; ITGB3BP; DDIT3; EPAS1; VGLL1; ATF3; GTF2F1; MED25; NFIB; MYBL1; THAP7; ZNF394; TAF4B; TOB1; PROP1; PAWR; E2F4; CBFA2T3; C1QBP; ING4; SIRT7; MED15; PA2G4; TP63; RNF6; TBX2; NOC2L; ARNTL; NR2F1; NR4A1; NFE2L3; STAT2; NPM1; IRF6; STAT1; BHLHE41; CDK2; LHX6; BRD2; RBL2; HMGA1; SP110; FOXC1; NFATC4; CCNC; MXI1; RING1; CCNT1; TFAP2A; KLF2; ZNF224; PBXIP1; PDLIM1; ZNF573; SP140L; LITAF; HHEX; JUN; HOXA10; SP100; RNF141; ATF5; IKZF1; LOXL2; ARID5B; TGFB1; TFCP2L1; CDK9; CALR; HLTF; FOXG1; CBX7; NR4A2; ELF5; NR1H3; NR3C2; VPS72; CERS4; HDAC1; ELK3; CD3D; OSR2; CNOT3; PFDN5; SPDEF; ZBTB16; NR0B1; RORA; ZNF165; PAX5; TXNIP; SOX9; TFAP2C; SNAI2; HOXA5; TRIB3
Down-regulation	306	SOX11; PATZ1; ZNF532; TLE4; VGLL4; SMARCA4; SMARCC1; SP3; NRIP1; TCF12; PUF60; RFX7; PHF2; SALL2; ZMYM2; ZNF189; HDAC2; BAZ2B; ZEB2; RBM14; MTA1; MAGED1; TBL1X; NCOA6; NUP62; PCGF2; MYB; TCF4; ADNP; USP22; CCNA2; ZNF711; SMARCE1; GLI2; NFKBIA; ERBB2; SOX17; BPTF; ZKSCAN7; MYCN; WHSC1; RLF; BASP1; NFE2L1; BRD3; GABPB1; ZNF629; SETD2; BAZ1B; ARID4B; MED24; TLE1; HMGB2; FOXO3; LZTS1; UBP1; ZNF282; ZNF248; SMAD4; ZMIZ1; ING3; ZNF134; ZBTB1; GTF2IRD1; ZHX2; VEZF1; APEX1; TRRAP; MED1; ZFP64; NHLH2; EYA1; HAND1; SALL1; CUX1; RSF1; ZFP36L2; MYT1; CTCF; MEIS1; NCOR1; KDM5B; HIPK3; SUV39H1; REPIN1; FOXN3; NCOA2; FUBP1; HMGA2; ZNF84; ZBTB14; ZNF337; ID4; DDX17; MEIS2; RFX5; MYRF; ZBTB38; BRD7; PMF1; SREBF2; ZNF146; RXRA; HIVEP2; PLAGL2; CHD3; PHOX2B; HMGB3; TP53; PSPC1; CHD9; BCLAF1; MTDH; ZFY; ISL1; TGIF2; RARA; NONO; KAT6B; NRF1; CHD7; HMG20A; MYT1L; TFEB; MED6; TRAK1; ZZZ3; TRIM24; SMARCA5; ZMYND8; PBRM1; PRMT2; DPF2; CENPF; PARP1; HSF2; ZNF302; NCOR2; ZIC3; LIN28A; ASXL1; SOX2; SMARCC2; PKNOX1; SCMH1; ZNF516; SMAD2; EWSR1; HDGF; TCERG1; NFKB1; MED13; ZNF43; SCAND1; ZNF292; SIX3; NAB1; SOX12; EP400; SIAH2; GTF2I; CBX5; JARID2; SSRP1; CBX3; FOXM1; SMAD1; ZBED4; KAT7; ZNF148; ZNF253; SAP30; RCOR3; ZFHX3; HMGXB4; KMT2A; ELF2; HNRNPD; E2F3; ENO1; EP300; KDM5A; MTF2; RHOA; ETV1; NCOA4; ALX1; MSX1; TOX3; SMARCD1; ARID3B; PIR; TBL1XR1; INSM1; ZNF93; PBX1; SND1; USF2; TADA3; HIVEP1; ATF2; REST; ST18; TRIM28; RNF111; TCF25; FLNA; E2F5; CARM1; PAXBP1; MEF2A; RBFOX2; ID2; HIC2; BAZ1A; PBX3; PHF20; CHD8; URI1; PSIP1; ZNF606; EHMT2; CTNNB1; ZNF135; NFYC; HOXD3; ID1; ZNF140; ZFPM2; ZMYND11; TAF9B; BMI1; BCOR; CTBP1; AGO2; CHD1; ARID1A; TSC22D1; MED23; MSC; ZNF217; CARHSP1; ZKSCAN1; BACH2; FOSL2; TAF1D; NKX2-2; E2F6; DEK; PCBD1; ZNF24; AEBP1; CUX2; DNAJC1; MLLT10; ETS2; DEAF1; ZNF432; ZNF423; CREB5; CENPB; SMAD6; PLAGL1; TRIM16; PRKDC; ZEB1; MAFB; EMX2; ZNF329; RYBP; CREB1; ZNF83; ZFP36L1; ZNF22; NFYB; BATF3; ASCL1; DDX5; RNF10; HEY1; ZNF3; TOX; ID3; HMGN3; EDF1; KDM5D; ZSCAN18; ZNF529; TFEC; NR2F2; MAF; TCEB2; CAMTA1; SMAD7; DNMT3B; ABL1; LEF1; HOXC6; NCOA1; ZNF267; XBP1; SATB2; EYA2; BTG1; TCEA2; EGR3