Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID56818	Trichostatin-a	GSE92742	ASC	Human	24h	10uM	EID0289

Response Information :

Types	Number	Response transcription factors
Up-regulation	123	ADRB2; NFKBIA; ECD; RHOA; HMG20B; SETD3; FOS; ID2; RELB; TCFL5; JUN; DLX2; BCL3; TSG101; PPARD; RUVBL1; KDM5B; TCEB2; NFIL3; SMARCD3; HDAC3; ING2; SAP130; ZSCAN32; RUVBL2; WWC1; NR3C2; PIAS1; STAT3; SND1; CCNE1; NR4A2; DBP; CBFA2T3; HDAC2; PHF20; SNIP1; ZNF711; HSF2; CAMTA1; RBBP5; JUNB; TFDP2; SOX11; RFXANK; TBP; IKBKAP; SUMO1; NFYC; RCOR1; NLK; GTF2A2; FOXA2; ETS2; PBXIP1; ASCL1; HDAC5; ZNF224; L3MBTL1; REL; RNF111; ID3; YWHAB; NEDD8; GABPB1; SNAI1; NFE2; ERF; TLE4; NR4A1; CREB3L2; HBP1; FOSB; TSC22D2; PAWR; SUPT4H1; CCNC; CHD1; ERBB4; FOXF1; RYBP; SALL2; ZNF331; HDAC1; THRA; ESRRG; SOX9; CRYM; ATF3; SPIB; GATAD2A; SMARCA1; URI1; FOXC1; IRX5; SMAD6; NR4A3; SSBP2; IRF7; HLTF; MXI1; CUX1; NFATC1; TCF21; ZNF652; ID1; TAL1; LITAF; E2F6; JUP; RUNX3; NR2F1; HHEX; PITX1; CTR9; TOX3; PBX3; MYCL; CITED2; EZH2; KDM5D; NKX2-1; NFKB2
Down-regulation	160	ATF5; PCBD1; HIF1A; FOSL1; FOXM1; XBP1; PPARG; PTRF; USP22; CEBPG; CEBPD; HMGB1; EN1; ATF1; HMGB2; CEBPA; DEK; ZNF140; PRMT2; PHF2; RNF6; PIR; TP53; TSC22D3; ARL2BP; CITED1; ZHX2; TRIM22; TCEA1; TWIST1; CBX3; ZEB2; MTDH; PBRM1; TGFB1I1; NCOA2; RNF138; SP3; NRIP1; VAX2; EWSR1; SCMH1; WIZ; HOXA10; ZBTB1; STAT6; MLXIPL; NFE2L1; CCDC59; AR; HDGF; NCOA4; MYBL1; ZFX; PAX5; REXO4; TLE1; POU5F1B; PRRX2; TFAM; ZNF529; AGO2; SP140L; ZNF219; PLAGL1; ZMYM2; PAX8; RXRA; YEATS4; CTBP1; IFI16; EBF2; CAPN15; YBX3; MYC; ZNF189; EYA2; STAT5B; HOXA11; STAT5A; EYA1; CENPF; ZBTB16; NCOR1; SUV39H1; SHOX2; SMARCA2; VGLL4; SAP30; MTA1; SMAD3; RB1; NPM1; HMGA1; BCLAF1; SOX13; KAT2B; BAZ1A; ESR1; SNAI2; YBX1; TEAD4; TXNIP; APEX1; ZFP36L2; FOXE1; WHSC1; ATF4; KLF9; HOXB2; BBX; HOXB7; BTG1; MECOM; LOXL2; CSDE1; EGR2; ID4; ZBTB38; MSC; KLF2; PRRX1; LEF1; UBP1; ZNF146; EHF; HOXC10; TRIP6; CTNNB1; BIRC2; CTBP2; NPAS2; TCERG1; ZNF264; LIN28A; HOXC6; POU2AF1; FOXO1; AHR; NFIB; SOX17; HMGA2; MAFB; NANOG; ZFP36L1; BNC2; HIRA; SIX2; EMX2; TRIM29; ZNF302; RBPMS; NKX3-1; HOXB6; TFAP2C; BHLHE41; DMTF1; CCNA2; NFKBIB; EGR1