Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID56313 Vorinostat GSE92742 HA1E Human 6h 10uM EID0283
Types Number Response transcription factors
Up-regulation 289 LPIN2; HOXB13; HABP4; MDFI; SETD3; MEIS1; REXO4; PSIP1; WIZ; GATAD2A; BAZ1B; ATF3; HIVEP1; SIN3B; RNF10; NELFB; CBX4; HIPK1; SMAD7; ZNF45; PITX1; TTF1; NKX3-1; HDAC5; CEBPB; TLE4; ATF4; HDAC1; CTR9; CSDE1; SMAD6; ZNF189; NOC2L; SF1; TOX; ADNP2; CARM1; ETS2; ZNF783; IRF3; PA2G4; TAF11; MKL1; LZTR1; ZNF593; HDAC3; ZNF146; NPM1; HLX; NCOA3; ERF; ZSCAN2; ZNF281; RAN; BRD4; ARID4A; TBX3; IRF1; CCNE1; TGFB1; NFIL3; PBX2; HDAC2; MYCBP; CRY1; TRIM27; ENO1; IKBKAP; ZNF268; XRCC6; ID3; ORC2; EP300; ZSCAN12; SREBF1; FLNA; RNF4; CNOT3; SMARCD1; YBX3; TAF10; MED16; MED23; BTAF1; HIF3A; KDM4C; RNF138; TERF1; TDRD3; ZBTB48; TRIM16; BATF3; ZNF195; MEF2D; CTCF; PEX14; TBX1; NAB2; HINFP; ARNT; RFC1; TAL1; KDM5C; SIX1; EHMT2; ZBTB17; RBM14; CIC; ATF2; HLTF; NFX1; LITAF; TCEA1; BCL3; ISL1; HIRA; CREB3; CDC5L; JARID2; LOXL2; PRKDC; RUVBL1; ZBTB11; PPP1R13L; MYRF; CD3D; SRF; FOXF1; ZNF580; TCF3; RUNX1; BRD2; DLX2; SCAI; ZNF576; ARID5B; MED24; HSF1; ARHGAP35; PPRC1; ZFP36L1; CRK; TFE3; JUND; SMARCA4; SOX13; RBBP4; SMARCD2; MED15; ZNF302; TAF7; HDGF; SND1; DNAJC2; SSBP3; WWC1; RCOR1; PPARD; HMG20A; KAT6A; TFDP1; ECD; SSRP1; MSX1; TFAM; JUN; RYBP; GLI3; CDK7; SUZ12; CDK9; LDB1; BRD3; CENPB; SUPT7L; UIMC1; ID1; ZNF84; NONO; SIX2; ZXDC; ARNTL; CDK2; GABPB1; ZNF468; SOX4; TBPL1; ARID1A; KMT2B; NFYA; ELK1; MED21; EDF1; CITED2; SAFB2; SETD2; ID2; BRD8; SPEN; PSMD9; PMS1; PTTG1; PSMC3IP; RLF; PHF20; CALR; BHLHE40; KLF7; SUPT5H; ARNTL2; NR0B2; ZNF573; ZNF24; HOXC4; GTF2A2; TRRAP; NFRKB; TOPORS; NFE2L2; ARL2BP; TAF6; THAP10; HSF2; MED27; HBP1; SUMO1; CCNA2; SMAD4; ARID5A; IRF2; VPS72; ZNF23; APEX1; RBPMS; ZNF500; RBPJ; NR2C1; DRAP1; PBX1; TEAD3; CREG1; ZNF467; NUP62; POLR2A; PREB; PEG3; SUPT3H; COPS5; FOXL2; MYBL2; RBL2; SKI; DR1; MNAT1; EZH2; NCOA4; FOXF2; ZHX2; RB1; PBXIP1; NR2F1; PARP1; ZNF22; STAT1; KLF2; TRIP6; GTF2IRD1; TGIF2; BANP; DNAJC1; SUB1; TLE1; SIM2; KLF6; ZNF432; HLF; CNOT2; ZNF217; FOXO4; CEBPG; TEAD4; FUBP1; ETS1; CENPF; THAP11; NR2F2; ERBB2; HHEX; EMX2
Down-regulation 238 ING3; ASH1L; FOSL1; NFKB2; POU2AF1; ZBTB20; CTBP2; RARB; ZNF273; ELF5; SOX10; HOXA1; FOXI1; IRF4; NR1D2; TFCP2L1; HDAC4; ZNF343; TAF1; AEBP1; EHF; EGR2; PDLIM1; MXD1; ZNF507; SOHLH2; ERBB4; BATF; CBL; EYA2; TRIM25; STAT3; MDM2; LHX1; PRRX1; LIMD1; FHL5; PRRX2; GFI1; MYT1L; TXNIP; ZNF671; SATB1; PIR; KLF5; CHD2; SOX21; ACTL6B; PRDM1; ZNF253; ZBTB3; ZNF124; PGR; ZNF606; TLX3; HOXA3; ZNF443; ZNF701; ZBTB16; MYC; KLF8; PEX2; HDAC9; ZFP2; ZBTB38; PPARA; HMGA2; ZBTB25; ZNF665; ZNF43; BRCA2; NR0B1; IRF6; MYT1; PAX8; BCL6; ZBTB44; TFDP3; FOXE1; ZNF93; OLIG2; ZNF263; SPIB; CBX7; CDX1; PRDM13; ZIM2; NRL; KAT7; ZNF672; GTF2I; AFF2; MXD4; GLI2; CRYM; ZNF200; ZNF551; ETV6; UBE2I; PCGF3; RBL1; PRPF6; BRWD1; MAFB; THRB; VGLL1; NR4A2; KLF9; ZNF264; SATB2; LHX6; IRF5; ELF3; REL; HIPK3; SSX1; ZFY; ZNF141; CEBPE; ZNF165; NFAT5; STAT2; EGR3; PPARG; PITX2; ZNF770; ZNF85; HOXB7; GLI1; PRDM5; TFEC; MED1; BIRC2; ID4; HOXA5; ALX1; TP63; ZNF34; HOXD3; NCOA6; SMAD2; KLF11; ZNF532; SOX5; ZNF652; CHD7; HEY2; ANKRD1; RCOR3; ETV1; HMGB2; IRX5; MKL2; RELB; ZBTB1; ZHX3; SOX17; CREBZF; ZNF107; BCL10; NFE2L3; XBP1; NFKB1; GATA3; NCOA2; ELF1; ZNF117; WWP1; ZNF430; SIX3; ARID3A; PQBP1; IL16; HOXA10; ZNF91; ZFP64; ZMYND8; STAT5A; ESRRG; HMGB3; BACH1; MITF; TBL1XR1; MXI1; PHIP; NR3C2; TCFL5; TOX3; NPAT; MNDA; NEUROD1; MLXIP; NANOG; NKX2-1; FOS; TLE2; KAT6B; BTG1; ZKSCAN1; EGR1; TBX2; TFEB; ETV5; HOXA11; RBBP7; SMAD3; YAP1; MDM4; FOXN3; VDR; RFX5; SSBP2; ZNF721; DACH1; LMCD1; TFAP2C; KDM5D; MAGED1; PBX3; SP100; KLF10; ESR1; WWTR1; NFATC4; MEF2C; ZSCAN18; NPAS2; HOXB2; E2F2; EED; ZBED2; ZNF589; ZEB2; SUV39H1; CREB3L1; FOXC1; MYB; LEF1