Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID56312 Trichostatin-a GSE92742 HA1E Human 6h 10uM EID0283
Types Number Response transcription factors
Up-regulation 280 RBL2; ORC2; HOXC4; SKI; ZNF443; BHLHE40; ZNF83; RCOR3; FOSL2; MKL1; ASH2L; TOB1; ATF3; ENO1; TAF7; HLX; KDM5A; UIMC1; PITX1; CRY1; JAK2; ZBED1; POU5F1B; ZNF239; ZNF266; ZNF84; HOXB13; KLF2; CCNT1; ZNF93; CSDE1; SAP18; TTF2; SMARCD1; ISL1; ETV6; HOXC6; CNOT1; NR4A3; CBX4; HINFP; PNRC1; MYCBP; CALR; NCOA1; SMAD6; TOX; EZH2; NFX1; BCL11A; JUND; TGFB1; SETD3; DDIT3; ZNF202; NFAT5; PHIP; ETS2; BRD3; CTNNB1; PKNOX2; ARID4A; PPARD; TFE3; ZNF10; ZNF816; SIM2; SMAD5; TEAD1; MED15; AR; ABL1; RBBP4; NR2C1; ATF1; MNT; FOXN2; NFRKB; PURA; ATOH1; ZNF571; ZIC3; BRD7; ZNF184; ZNF143; CARM1; NR1D2; CCNH; KLF12; ZNF253; MAF; PRMT2; ZNF586; LITAF; PTTG1; HDAC6; TLE4; NR4A2; NFIX; HIVEP1; MED21; RUVBL1; GATA2; FLNA; ZNF331; GABPA; ZBTB43; ZNF552; SREBF2; HTATIP2; CEBPZ; TSC22D1; HABP4; MYCN; CREB5; MED27; ZNF432; SMARCB1; CERS6; ZNF468; ARID5A; LMCD1; NCOR1; SCMH1; ZFY; SOX4; GATAD2A; UBP1; FOS; DNAJC1; SSBP3; PSMD9; ZNF136; SMARCC1; C1D; NANOG; NPM1; NFYA; BRD8; MITF; DYRK1B; HOXC10; PA2G4; XBP1; ZNF134; COPS2; TEAD4; LYL1; NSD1; ZNF669; XRCC6; NELFB; SPI1; THRA; HIVEP2; ETS1; FOXF1; ZNF205; PPP1R13L; ZBTB25; MTA1; TBPL1; LIN28A; NCOA3; PLAGL1; CAPN15; HDAC1; ZSCAN16; TFAP2A; EHF; LZTS1; MAFF; UBE2I; RHOA; TRIM16; HIRA; EP300; ZBTB11; KDM5D; TOPORS; SAFB2; ZNF232; IRF8; CREM; CDK7; MBD4; MED7; SP110; IRF1; JARID2; DEK; BANP; SFMBT1; YEATS2; ZNF544; ZNF140; ZNF500; CRYM; MSX1; CREB3; SND1; SP140L; CUX1; TRIB3; SP100; TAF1D; NR1H2; IRF7; SUMO1; DRAP1; SPDEF; PATZ1; SSRP1; FOXA2; RNF4; SSBP2; ZNF415; STAT6; SLC2A4RG; SSX1; MXI1; TFEC; MEIS1; BLZF1; TOX4; CREBL2; MYCL; ZNF354A; DDX17; ZNF33B; CENPF; BACH1; TSG101; RNF10; ZNF248; CITED2; POU4F1; FOXJ2; ZNF91; YBX2; HOXB6; TBX3; JUNB; ERBB4; KLF9; TFDP2; MLXIPL; HMGA2; HMGA1; HDAC9; INSM1; ZNF589; SMARCA4; IRF6; CBFB; E2F3; IKBKAP; KLF6; KLF4; ECD; PBXIP1; BCOR; NR4A1; MDM4; CNOT3; ID2; RAN; RORA; FOXF2; ZNF217; ETV5; CCNA2; GATA6; BIRC2; FUBP1; FOXG1; TFAP2C; PEG3; AEBP1; LOXL2
Down-regulation 285 POU2AF1; BASP1; NR1H3; TP53; INSR; SFPQ; WHSC1; KDM5B; NCOA6; RBL1; MBD1; ANKRD1; FOSL1; TP73; TFAM; HOXD11; RBM39; CXXC1; DCC; ARID5B; MED13; EGR2; SHOX2; ZNF343; GLI2; ARID4B; SATB1; MDM2; IRX4; FOXI1; ZNF688; ZNF532; IFI16; HOXA5; SOX11; HOXD10; KAT2B; ZNF536; TLE2; VPS72; HMGB2; ZNF672; SIX6; CD3D; MYRF; AIP; MECP2; PPRC1; NFKBIA; PLAGL2; SUV39H2; MAGED1; KLF1; GATA3; NEUROG1; CITED1; PTRF; HOXA4; HIC1; ZNF446; MNDA; WWTR1; SMARCA1; MED6; PAX8; ZNF324; PRDM1; SMAD2; ZBTB7C; ZNF146; PIAS1; MKL2; FOXE1; DBP; HCFC1; WWP1; GLI1; RELB; RERE; PRDM13; HOXA1; ZNF274; STAT3; ELF5; ZNF226; ENY2; YEATS4; BRD2; ETV2; TFDP1; TRIM22; ATF5; BRCA1; TCF7L2; ST18; ZZZ3; VGLL4; GFI1; NUP62; OLIG2; BARX1; TFCP2L1; PDLIM1; PPARGC1A; USP22; ZNF512B; LHX2; TAL1; RFX2; ZNF473; BATF; NKX2-1; NR2F2; ZMIZ1; ZNF711; CERS4; TRIP6; RUNX1; RNF138; RARB; TGFB1I1; ZNF444; PBX2; NCOA2; DEAF1; ZNF606; HOXD1; TLX3; OVOL1; EPAS1; ZFP36L1; ZNF22; NFKBIB; CBX5; HOXD3; TAF5L; DLX5; SOX18; MED1; CTBP2; MYT1; ZNF516; FOXK2; HLTF; SALL1; EGR1; ZFHX3; NR5A2; MAFB; PPARG; SCAND1; TCF21; STAT5A; PCGF3; SOX10; STAT4; IRF4; ZMIZ2; RNF6; ZNF813; HNRNPD; PQBP1; SIX3; KLF5; ASCL1; CARHSP1; KMT5A; RNF111; TSC22D3; ZEB1; ZSCAN18; MTDH; THAP11; ZHX2; NCOA4; EYA2; ZFHX4; USP21; PBX1; SUPT6H; ZSCAN31; RBM14; HIPK2; NRBF2; PAX5; KAT6B; ZMYND11; BHLHE41; TGS1; ZIC1; TAF9B; AATF; PCGF2; ILF2; ZNF580; IRF9; TCF12; FOXO1; PRRX1; SP3; ZNF3; HMGB3; PITX2; RREB1; ELF3; NR2F1; TULP4; ID1; SUB1; SMAD1; BACH2; BPTF; SMAD3; ZBED2; HSF1; ELF1; BNC2; TRIM32; TERF2; ZNF264; TCEA2; NR1H4; TP63; ZMYM2; TLE1; CRK; MED20; DAXX; SOX2; CBX3; EBF2; FOXD1; E2F8; TBL1X; GRHL2; ZBTB20; MEIS2; BLM; TCF4; TCF7L1; ZNF292; MEF2C; ERG; ATF6; SUV39H1; CEBPG; BAZ1A; SIX1; PIR; ZBTB16; E2F2; MBD2; HHEX; RBPMS; MYBL1; LIMD1; CEBPD; RUNX3; CNOT2; BCL11B; KLF11; SMARCD3; NRIP1; MEOX2; CTR9; HES1; ELK3; SPEN; HLF; TCFL5; ZNF131; HOXA10; MTF2; IRX5; FOXJ3; SMARCA2; DACH1; STAT1; DMTF1; FOXN3; OSR2; ZNF423; ERBB2; ESR1; SNAI2