Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID55102 Vorinostat GSE92742 HA1E Human 24h 11.1uM EID0266
Types Number Response transcription factors
Up-regulation 98 CREG1; ADRB2; NCOA3; TCEA2; IRF3; NFIL3; TCEB2; STAT1; SETD3; HABP4; RUVBL2; FOXO4; HMG20B; ZNF562; SOX4; ZNF10; MAF; INSR; SIRT2; PBXIP1; ZKSCAN1; RBBP5; TERF1; PIAS1; TCFL5; ZNF224; NLK; ATF3; YBX2; DBP; ZNF3; LDB1; SATB1; CITED2; CBX4; HTATIP2; HHEX; TCF21; HSF2; RNF141; CTR9; ZNF331; MYCBP; JUP; HBP1; PAX5; TOX; HLTF; HMGN3; L3MBTL1; CBX7; EPAS1; CERS6; ZNF573; JUNB; STAT3; MEF2C; HMBOX1; ZNF44; NR4A1; IRF6; KLF2; CBFA2T3; SP110; CREM; NRBF2; IRF8; HDAC5; AHR; FOSB; TOB1; NR4A2; ASCL1; SND1; SPIB; BCL11B; MTF2; CBX6; BTG1; NR3C2; ZNF117; OSR2; PPARD; TBPL1; TRPS1; CEBPD; GATA6; IL16; ZNF160; ZNF165; HEY1; FOS; ST18; POU2AF1; KLF6; TSC22D1; PIR; ID1
Down-regulation 167 LOXL2; TP53; PAX8; FHL2; NRIP1; FOSL1; ATF1; ATF5; DEK; TGFB1I1; CCNA2; PCBD1; HDGF; TCERG1; XBP1; HOXB2; BHLHE40; NFKB1; SP3; BAZ1A; HOXA10; SCMH1; FOXM1; ZEB1; RELA; NCOR2; STAT6; HNRNPD; ZNF22; PATZ1; CHD3; TFDP1; BASP1; SFPQ; WHSC1; HMGB2; RAN; TEAD4; ZNF282; IFI16; NUP62; SALL1; HCFC1; ZBED1; TAF9; CTCF; REST; CTBP1; RBM39; NFKBIA; HIVEP1; PMF1; GTF2IRD1; STAT5A; TCF25; BCLAF1; REPIN1; GABPB1; OLIG2; BCOR; TCF12; LHX2; PCGF3; HOXB9; MSC; DEAF1; HOXB7; FOXD1; ZMYND11; PSMC3; SMARCC1; TGIF1; ZFP64; HOXB6; SIAH2; MED13; TBL1XR1; PPRC1; SUV39H1; ZHX2; RARB; ABL1; SOX17; ELF4; CENPF; UBE3A; HOXB5; BRD3; RREB1; PHF2; SF1; ERBB2; ZZZ3; TGIF2; CBFB; SAP30; NCOA4; HMGB1; HOXC10; DDX17; SETD2; APEX1; ESR1; TFAP2C; ATF4; HOXD10; SMARCA2; SIM2; ZNF140; MAZ; ZNF532; POLR2A; CNBP; VEZF1; CREB3L1; MAFF; BTF3; ZBTB38; EYA2; PBX3; PITX2; ELF1; CCDC59; ILF2; YBX3; TRIM32; HOXA11; HOXC6; YAP1; NCOA6; EMX2; ZFP36L1; FOSL2; ANKRD1; LEF1; PRRX1; PCGF2; ZMYM2; HOXD11; SPEN; MTA1; TRIM22; TRAK1; MEIS1; PTRF; MEIS2; FLNA; MED1; ARNTL2; RUNX1; ZNF217; SMARCA1; AFF1; NKX3-1; TRIM29; ID4; ELK3; PUF60; VPS72; IRF2; WT1; ARID5B; ZBTB18; FOXG1; MSX1; KDM5D; BIRC2