Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID54592 Menadione GSE92742 HA1E Human 24h 10uM EID0265
Types Number Response transcription factors
Up-regulation 341 ADRB2; ATF5; ZNF10; PRDM10; ZNF141; ZNF195; ZNF695; ZNF345; EGR1; ZNF224; ATF3; MAK; SETDB1; FEZF2; GATA2; ZNF3; TCEA2; HHEX; PIAS4; ZNF180; E2F4; ZNF225; ZNF682; ZNF354A; FOXF2; EN1; ZNF576; DDIT3; ZNF222; NHLH2; PCGF1; PAXBP1; RYBP; SPDEF; ZNF232; SNIP1; KAT2A; ZNF81; MED17; CEBPG; ZNF136; IRF1; ZNF500; ZNF235; SOX4; FOS; POLR3F; ZNF74; ZNF234; ZNF573; SUPT7L; TRIM33; TGS1; ERCC3; ZFP69B; SCAI; ZNF227; ZNF544; FOXO4; ZNF41; ZNF749; ST18; NKRF; CNOT3; E4F1; ZIC3; ZNF557; ZNF562; HLX; ZKSCAN4; HSF1; PAX4; ZNF273; TAF5; ZNF674; CARF; ZNF780B; ZNF214; BARX1; ZNF473; ZNF362; SOX18; ZKSCAN8; NR4A3; ZNF623; CCNT1; ZNF131; SOX13; ZNF157; IRF8; SKIL; ZNF268; SOHLH2; REL; TBR1; ZNF304; GMNN; TAF1A; ETV1; ZNF155; VPS72; ZNF34; THAP9; CDIP1; ZXDB; SNAPC4; ZSCAN9; NAB2; POLR3C; ZNF551; ZBTB6; ZNF254; BRD2; ZNF154; TRIB3; ZNF440; ZNF80; ARID5A; INSM1; INSR; CBX4; ZNF257; HINFP; TOX; L3MBTL1; TTF2; ARNT2; SNAI2; ZNF696; DNAJC2; TDP2; POU4F2; MAFG; PBX1; ZNF83; ZNF331; ZNF12; ZNF529; ZFPM2; ZNF492; RRN3; ZBTB7A; ZNF165; MEIS2; PHIP; ZNF223; KLF11; RAD21; HEY1; RNF2; SIX6; ISL1; RBBP5; BAZ2A; ZBTB44; HSF4; PPRC1; ZNF263; ZNF44; ZNF675; TRAF6; ZNF350; AGO2; RING1; MED14; HDAC9; MEF2D; SOX3; ZBTB3; SAFB; ZNF423; ZNF8; SUPT4H1; TCF7L2; POU2F3; POU2F1; CUX2; PRDM4; HESX1; HIF3A; HIVEP1; ZNF135; ZNF654; NR1H2; NCOA3; HOXD1; ZNF701; PRDM2; KDM5C; GATA3; TAF4B; CAPN15; SPI1; PRDM14; FOXG1; BRWD1; NR2C1; LIN28A; ZNF124; TTF1; ZNF787; E2F6; ZNF574; MECOM; FOXE1; TRPS1; SALL1; ZNF91; FOXA1; NEUROD1; TWIST1; CAMTA1; HCFC2; ZNF22; ZBTB43; CAMTA2; ZNF202; HMBOX1; TDRD3; SOX17; LDB1; NKX2-1; JUP; ZNF7; TAF11; CITED2; PNRC1; ZNF281; ZNF140; RBPJ; ZNF43; ZNF112; NR4A2; ZKSCAN5; PBX2; ZNF611; KMT2B; PLAG1; ZBED4; WWP1; HOXB5; ARID1A; BLZF1; TBX1; COPS5; ELF4; MBD4; ZNF239; RNF138; TERF1; TFEC; ZNF512B; ZNF117; TCF21; CEBPB; SOX11; ZNF426; CBFA2T3; HBP1; BACH1; ZNF692; FOXF1; NANOG; PEG3; NR4A1; ZNF184; NFYA; TOPORS; BTG1; ZNF532; MNDA; NRBF2; ZNF334; ZNF264; CREM; KLF4; THAP10; NCOA2; E2F3; ZNF302; MDM2; ID2; TFAP2A; MEIS1; THRA; GON4L; DNMT1; ZNF432; ZNF571; NFE2; SPIB; ZNF329; TFAP2C; ZNF133; TAF1D; SSX1; EHMT2; SHOX2; CREB5; ZNF665; HOXB2; TFAM; ZBED2; JUNB; ENY2; HES1; MYBL1; ID3; SATB2; CERS6; TRIM22; PHF1; PLAGL1; IRF9; TCF7L1; TAL1; WT1; ZNF394; GABPB1; UBE3A; MAFB; HMGA1; HIC2; PIR; PPARD; IRF6; CALCOCO1; BRD4; IFI16; BANP; ZNF175; TGFB1; ZNF274; ZFP36L2; TULP3; YBX3; ZBTB16; TSC22D1; HIPK3; NFE2L3; ACTL6A
Down-regulation 256 RHOA; LOXL2; ASH2L; DDX54; NCOA4; BCLAF1; MAGED1; EDF1; PAX8; SP3; BRD3; MXD3; NEDD8; HOXC6; SMAD2; USF2; ZNF672; CASZ1; ZMIZ2; SIAH2; CCNA2; CHAF1B; HNRNPD; NCOR2; REPIN1; RELA; NRIP1; CENPF; NPAT; SMARCA5; ATF1; PURA; HDAC1; LMX1B; PAX2; SFPQ; ZNF282; MXD4; TRIM16; ENO1; WWTR1; ZNF629; ZBTB1; MMS19; ING2; NFE2L1; KLF12; PATZ1; REST; HOXB9; TRRAP; MBD2; TP53; PRRX2; DLX6; SETD3; VEZF1; MYBL2; DNMT3B; NCOR1; SMARCD2; ZHX3; HOXA10; PHF20; FHL2; CBX5; HLTF; KAT7; NFATC1; ZNF783; SMARCD3; BRCA1; AFF1; SIM2; BASP1; RBL1; CBX3; SREBF2; RBBP4; KMT2D; SCAND1; NELFB; BATF3; HNF1B; RUNX1; TSC22D4; ZFP64; NR3C1; PCBD1; MKL2; CARHSP1; DRAP1; NFKBIA; MYOD1; RNF14; HIVEP2; ALX1; BHLHE40; HMG20B; HDAC3; TADA2A; NAB1; TRIM32; ZBTB25; AIP; TXNIP; STAT3; MTA2; UBP1; ZBTB48; KAT5; ZNF248; PRMT2; BMI1; POLR2A; NR2F2; HOXD9; ERCC2; TGFB1I1; ARL2BP; BARX2; FLNA; EYA2; ZMYND11; WWC1; PIAS3; KDM2A; RNF141; ITGB3BP; NUP62; RBL2; CREB3L1; ELF1; TOB1; GTF2IRD1; SAP30; CHD1; CBFB; ZEB2; ZBTB38; RARB; SND1; ELK1; EP400; LIMD1; STAT1; ATF6; CTNNB1; PITX2; FOXD1; RERE; SOX15; IRF5; HOXC4; HSBP1; CNOT1; XBP1; CHD3; TCFL5; TCF12; RCOR1; DEAF1; HDAC2; PEX2; MSC; ZNF226; BAZ1B; KAT8; ELK3; RFX2; BCL11B; SMARCA2; RNF111; RBM14; SMAD5; MEF2A; SMARCA4; TERF2; DEK; MED15; BRD8; MYF6; NCOA6; ING3; SIX1; PTTG1; ORC2; HR; TEAD1; PMS1; CRK; ZBTB18; SPEN; NCOA1; ZKSCAN1; CCNC; PBRM1; TRAK1; SMARCE1; KAT6B; GTF2I; URI1; CENPB; NR1D2; FOXL2; HOXC10; TCEA1; ZZZ3; ATF7IP; YWHAB; SUV39H1; RREB1; FOXC1; IKBKAP; BCL10; TULP4; CITED1; RNF10; PREB; MTA1; PCGF2; TRIM25; TAF10; NFATC4; PMF1; IRX5; ELF3; PRRX1; MAX; ZBED1; ARNTL2; CTR9; SETD2; HOXB13; SUB1; HOXD10; RNF4; NPM1; LEF1; YBX1; HMGN3; BIRC2; PIAS2; CCNE1; KDM5B; NFIC; STAT6; HMG20A; COPS2; IRF4; FOSL1; PRKDC; MNAT1; PTRF; NFIB; SMAD1