Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID52815 Trichostatin-a GSE92742 HA1E Human 6h 10uM EID0257
Types Number Response transcription factors
Up-regulation 96 HES1; NCOA3; ADRB2; TOB1; TSG101; FOXK2; CTR9; HBP1; ELF3; INSR; SSBP2; ZNF331; OSR2; NR2C1; MLXIP; ARNTL; SPDEF; IRF6; CD3D; FOXO4; LDB1; NR3C2; TLE4; CALCOCO1; CREB3L2; ZNF211; STAT4; DBP; HDAC5; ATF7IP; RUVBL2; UBE2B; ZNF443; BCL11B; LITAF; FOXJ1; ESR1; BCL11A; SREBF1; GLI3; ISL1; ZBTB16; SMARCD3; NRBF2; PHF20; PPARD; SNAI2; IKZF1; IKBKAP; TCEB2; TCEA2; PIAS1; HAND1; IRF4; TERF2; CBFA2T3; MYRF; THRA; ZSCAN18; ZNF117; ETV5; EP300; ZNF232; ZNF268; PBX1; KLF13; FOXC1; ZNF423; SMAD7; PEG3; CREG1; EYA2; FOXO1; DDIT3; PBXIP1; MYCL; SSBP3; FOXN3; MKL2; LEF1; FOXF1; RORA; TBX3; ATF3; EYA1; HMBOX1; GATA6; SPIB; KLF11; ZMYND8; ST18; NR4A2; MAF; ARNT2; CITED2; ZBTB18
Down-regulation 131 PAX8; NRIP1; HOXA10; SFPQ; MYC; NUP62; FOSL1; HOXA5; HOXA7; PUF60; ATF1; NFKBIA; FHL2; FOXM1; HMGA2; ZBTB1; HOXB5; RBM14; BCLAF1; HOXB7; GABPB1; SMARCA4; DEK; ENO1; XBP1; HNRNPD; PATZ1; APEX1; USP22; ING3; TCERG1; MED1; CCDC59; HDGF; BHLHE40; BAZ1A; PMF1; SMAD3; HDAC6; GTF2I; CBFB; ADNP; ZNF146; CTBP1; UBE3A; NFKB1; ZBTB3; WHSC1; EWSR1; ZFX; FOXE1; ZNF292; FOXD1; KAT5; HOXB6; ING2; NFYC; RELA; DDX17; ZBTB38; ZNF770; KLF6; ZBTB24; PGR; TEAD4; SALL1; TSC22D2; REST; BNC2; SMARCB1; GATAD2A; STAT6; DNAJC2; HIRA; RBL1; ELF4; PHF2; EGR2; ELF1; TEAD1; ZFP36L1; PKNOX1; VEZF1; ZSCAN31; HMGB2; TGFB1I1; YEATS4; NPM1; CIZ1; BCOR; SP3; OLIG2; AES; ATF5; FOSL2; SOX17; YBX3; EGR4; BCL6; ZNF91; NEUROD1; WT1; VGLL4; NCOR2; MEIS1; IRF9; E2F3; CCNA2; PQBP1; MTA1; ERBB2; PCGF2; HLF; HOXC10; ID4; IFI16; RUNX1; SIAH2; TRIP6; BASP1; ERF; MYCN; ASCL1; HOXB2; ZBED1; KLF10; BHLHE41; POU2AF1; EGR3; SUV39H1; RELB