Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID51082 Vorinostat GSE92742 HA1E Human 24h 10uM EID0250
Types Number Response transcription factors
Up-regulation 124 TERF1; ZNF44; ZNF562; SETD3; NCOA3; SSBP2; ZNF443; ZSCAN32; RUVBL1; DBP; PBXIP1; ZNF394; ZNF573; TCEA2; IRF3; CBX4; PIAS1; SIX1; CD3D; CTR9; STAT3; ATF3; HDAC3; INSR; SND1; CREG1; CBFA2T3; NR2C1; ZNF415; FOXO4; HINFP; CCNE1; TOX; ZNF331; ZNF268; JUNB; HDAC1; ZNF211; ZXDC; TCEB2; ZBTB11; NR4A2; HIC2; LDB1; MYCBP; ZNF3; SOX4; AHR; BCL3; POU4F1; PBX2; IRF1; RUVBL2; TWIST1; ZNF184; NRBF2; ZNF329; JARID2; NR4A1; HBP1; EP300; ZNF281; HLTF; ZNF43; MEF2D; TFDP2; RBBP5; CRYM; ID3; ZNF711; TAF10; ZNF117; SALL2; OSR2; CERS6; HLX; TDP2; DDIT3; HDAC5; ZNF45; ZKSCAN5; NCOA1; ZNF136; BCL11B; RCOR1; KLF11; ZNF423; ZNF468; EHMT2; NR4A3; MXI1; ZNF91; ZKSCAN1; SPIB; BRD4; RUNX3; JUP; ZNF266; MAF; CITED2; HTATIP2; TRIB3; MNDA; MYCL; IKBKAP; KLF2; CREM; FOS; FOSB; MAFB; NR0B1; HOXD1; IRF8; ZBTB20; PPARD; ID1; TCF7; HEY1; HHEX; ERBB4; ZSCAN18; ADRB2; LEF1; HMG20B
Down-regulation 165 PAX8; FHL2; NRIP1; NFKBIA; FOSL1; LOXL2; NFKB1; PCBD1; BASP1; BHLHE40; TGFB1I1; DEK; FOXM1; XBP1; ABL1; ATF1; BAZ1A; PHF2; ERBB2; MEIS1; STAT6; ZBED1; ADNP; SMARCA4; HOXB9; HOXB2; HDGF; DDX17; NCOR2; PATZ1; FOXE1; MTA1; GABPB1; HOXB6; NCOR1; HMGB1; BATF; PML; ZMYND11; CHD3; TCF12; MYCN; CBFB; CTCF; IRF2; TCERG1; HOXA10; HNRNPD; CCNA2; ARL2BP; NUP62; ZBTB38; ELF1; SP3; GTF2I; PCGF2; MBD2; PMF1; SMARCE1; SMAD4; GLI2; WHSC1; BRD3; SIAH2; ASXL1; RBM14; TFDP1; FOXD1; CREB3L1; ZNF532; SALL1; CCDC59; VEZF1; YAF2; GTF2IRD1; HOXB5; TRIM22; EMX2; ZBTB1; BATF3; SFPQ; TEAD4; TGIF1; ZNF580; MAFF; PTRF; PRMT2; TRIM32; ZNF282; ARNTL2; NCOA6; CENPB; TBL1XR1; SCMH1; RELA; APEX1; SAP30; SMAD3; ZFP36L1; TAF9B; LIMD1; LHX2; ANKRD1; ZMIZ1; PBRM1; RBPMS; MED1; ATF5; HMGB2; NCOA4; YBX3; HIPK3; BPTF; PSMC3; OLIG2; HOXC6; SETD2; TFAP2C; RBM39; ZHX2; HMGA2; CENPF; BAZ2B; ELK3; SOX17; SPEN; ZSCAN31; BCLAF1; GATA4; RAN; REPIN1; IFI16; NKX2-1; ELF5; ATF4; CTBP1; ZFP36L2; SMARCC1; FLNA; SMAD7; MED13; HOXB7; KAT6B; NCOA2; ZNF512B; SLC2A4RG; SMAD2; SMARCA2; ZEB1; MEIS2; TRIP6; TBL1X; AFF1; HOXC10; ID4; TRIM29; HLF; NR2F2; SSX1; TSC22D3; ESR1; SOX11; SUV39H1; WT1; E2F2