Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID50227	Tretinoin	GSE92742	HA1E	Human	6h	10uM	EID0247

Response Information :

Types	Number	Response transcription factors
Up-regulation	308	SSBP2; KDM5A; GATA2; ZFPM2; TBP; CREM; PIAS1; SKI; NCOA1; ZNF227; CEBPD; ZNF701; WWP1; EMX2; ZBTB25; NR1H2; CAPN15; ZNF226; HLX; LMCD1; SMAD4; NEUROD1; NR5A2; HMG20A; ZNF331; ZKSCAN7; SSX1; ZNF281; EP300; KLF3; MSC; PITX1; SMARCA1; BRPF1; ZBTB7C; CREB3L2; RORA; SSBP3; TEAD1; ZNF573; MAF; WHSC1L1; ZNF688; ZNF768; ARNT; KMT2B; NR2F1; ZHX2; NRBF2; GFI1B; ANKRD1; SIX5; SKIL; HCFC2; SMARCA2; MAFB; KAT2B; TFE3; WNT4; FOSL2; SOX3; BARX2; ZNF225; ZNF205; SUPT5H; NFIB; DNAJC1; NR1H4; IRF5; MEF2A; POU1F1; ZBTB6; MLLT1; LIMD1; SND1; TMF1; HIC1; SUV39H2; TAF12; SRF; SOX13; RFX1; TBX19; E4F1; RFX7; ZNF623; ZNF764; CDK8; GATA1; ZEB2; HTATIP2; TAF5; ZNF571; ZIM2; BACH1; CBFA2T3; PAWR; CSDC2; HDAC5; ZNF35; MYT1L; ZNF292; SOX18; RSF1; POU6F1; PAX8; TEAD3; NEUROG3; MYF6; STAT2; PROP1; TADA3; NKX2-8; ZFP36L2; BCL11B; ZNF516; MKL1; TSC22D1; ING4; FOXE1; KLF4; LDB1; PHIP; ZNF93; SETD2; ZNF532; FOXL2; PBXIP1; ELK4; POLR2A; RRN3; ZNF692; BRWD1; TBX1; ZFX; EYA3; ZNF710; ZNF107; ZBTB20; UBE3A; STAT5A; ZNF236; CDIP1; RBBP5; ZNF234; AGO2; HDAC7; ZNF180; NFE2; TFAP2B; FOXB1; VGLL4; ONECUT2; ZNF358; ATF7IP; MLLT10; RXRA; TCF15; CITED2; ZNF350; TBX3; ZBTB7B; ZNF160; RARA; ZNF224; SIM1; ZNF721; SETDB1; LHX3; PRKDC; ZNF45; OLIG2; TCF7L1; ZNF85; SAFB; CREBZF; NCOA3; ZBTB3; PRDM10; IKZF2; CBX7; HIC2; CALR; OSR2; PAX5; BAZ2B; RAX; ZNF222; ZNF787; MAFG; SSX3; TOPORS; KAT6A; ZBTB39; OVOL1; TRIP4; THAP7; HR; ZNF771; PIR; ZBTB24; RUNX3; ZNF91; SPI1; PLAGL1; ZBTB16; HHEX; ZNF500; MXD1; ETV6; RBPMS; EGR4; PCGF3; PPP1R13L; PEX14; NR4A1; MYBBP1A; ZNF273; ZNF254; NCOR1; ZNF257; PRDM1; CBX6; PEG3; CIC; NFE2L2; CD3D; ZNF492; ZNF675; FOXJ2; PLAG1; TULP4; CTNNB1; BRIP1; KDM5C; SAP30; ZNF32; MYCL; GATA3; AHR; YEATS4; ZNF43; YEATS2; TRIM24; TRIP11; DNMT3B; BRCA1; MAFK; SAFB2; NANOG; SMAD3; ZEB1; ZNF354A; PBX2; NR1D2; DDX54; NFAT5; ZNF329; POU5F1B; FOXO1; TRIM25; ZNF665; FOXJ3; EPAS1; ELF5; TRPS1; THAP10; SOX17; ZSCAN16; CEBPZ; NKX2-1; JUP; LIN28A; MYBL1; NR3C1; TSC22D3; NLK; BTG1; SPIB; ZNF611; CARHSP1; INSR; HSF2; EGR2; MBD2; AR; NFE2L3; JAK2; MEIS2; NR3C2; ERBB4; KLF9; HMGB3; IRF4; WT1; KAT6B; ESR1; MEOX2; SIX2; FOXG1; IFI16; BBX; BHLHE41; TP53; TRIM22; ETS2; TOX; PSIP1
Down-regulation	366	HOXA5; SCAND1; NRIP1; TLE1; RUVBL1; ATF1; CDK2; RFX5; NR2F6; DNAJC2; ATF6; ZNF589; RNF4; HDAC2; DEK; ILF2; NFKBIA; ITGB3BP; NKRF; GTF2A2; RBM39; GTF2IRD1; CERS6; PTTG1; ECD; HIF1A; CDC5L; SERTAD2; PHF20; BCLAF1; ZNF217; SUB1; CSDE1; SFPQ; TAF9; MGA; THAP4; HOXB2; LOXL2; ARID4A; CBFB; DNMT1; WIZ; DEAF1; EDF1; HOXA10; ATF4; MED13; HOXB6; PBX1; RNF138; SP2; IKBKAP; WWC1; TAF10; CCNA2; TRIM32; USP16; MZF1; MED21; TAF7; RFXANK; SMARCA4; TSG101; TCF25; BCL10; CHD1; HOXA4; PSMD9; CCNC; RAN; HOXA7; ZBTB18; BTF3; COPS2; BIRC2; TRIP6; FOXO3; SNW1; SP140L; ZFP64; NFIL3; PCGF1; SMARCD1; PRPF6; SPDEF; GMEB2; WDR77; MYC; NELFB; RNF10; BRD8; HNRNPD; HDAC4; HOXD1; DLX2; ZBED2; PAXBP1; NCOA6; PBX3; ZMYND8; HOXB5; APEX1; MAML1; SIM2; TCERG1; MTDH; CBX5; ZNF250; MTF2; TULP3; ZNF266; NCOA4; ARNT2; HBP1; ZNF426; EGR1; PDLIM1; PRRX2; MLX; ID1; NFKB1; ATF5; MEIS1; ID3; CRY1; ZBTB11; ELF1; ZFHX4; ZNF580; HMG20B; SP110; SPEN; MED16; FOXF1; CDYL; ZNF24; CBX3; DLX6; SUPT4H1; REPIN1; MNAT1; ID2; TFAM; KAT7; TUB; C1QBP; TCF3; SIX6; FOXD1; TOX3; RUVBL2; ZNF408; HDAC3; ZNF446; SIN3B; NR2C1; ZNF562; CBFA2T2; ZZZ3; ADNP; BRD2; NFRKB; TBPL1; MDFI; CRYM; NFKB2; ZNF536; USP21; RAD21; ZNF148; TRIB3; CTR9; PLAGL2; RYBP; ZNF444; PMF1; NAB1; ZNF12; NKX3-1; SUPT6H; FLI1; HAND1; BTAF1; STAT6; PRMT2; TAF5L; ARID5B; RING1; CNOT1; MED27; ZNF16; TDP2; RBBP8; ZMIZ1; HMGXB4; ETV4; HOXB3; PEX2; ZNF7; ENY2; YWHAB; BAZ2A; ERCC2; ZNF131; SOX9; ZNF512B; CCDC59; ING3; UBE2L3; ARL2BP; MXD3; FLNA; KLF10; OVOL2; SOX15; RUNX1; DDIT3; RFC1; GTF3A; SP140; HOXB1; KLF5; ZBTB1; DAXX; RCOR1; GBX2; ASXL1; FUBP1; ARNTL2; FOXM1; ZNF189; TGS1; CDX2; ETV5; CHD7; TOX4; ST18; PTRF; EHMT2; CAMTA1; ZBED1; ZNF232; CHD9; HLTF; ATF2; DMTF1; MYT1; COPS5; ATF6B; TOB1; ZNF410; MEOX1; E2F6; IRF8; MNT; CENPB; ZNF652; E2F5; SUMO1; TFCP2; ZMIZ2; MECP2; ZNF140; ISL1; SRCAP; GLI3; ARID4B; EWSR1; CITED1; SATB1; SUPT7L; DLX5; PRDM4; MED25; BATF3; URI1; CLOCK; NPM1; PHOX2A; E2F2; MSX1; SREBF2; ENO1; ZBED4; SATB2; BRD4; TEAD4; HINFP; SP3; ZNF195; RNF14; SAP18; RBFOX2; TGIF2; TRIM16; STAT1; BNC2; FOS; PCGF2; HIVEP1; SMAD1; SMAD2; ZNF264; PMS1; FOXF2; MED23; MAGED1; HIPK1; SMAD6; YBX1; HDAC9; MYRF; SP100; CBX4; JUND; NKX3-2; HMBOX1; DR1; ZNF202; HOXB7; KLF7; CREB5; SIX1; HDAC1; BACH2; MXI1; RNF6; TCF4; ZSCAN31; TERF2; ATF3; CREB3L1; FOXA1; KDM5D; TRIM27; BASP1; CTBP1; MECOM; SREBF1; WWTR1; BMI1; TBL1X; CNOT6; CREB1; MYCN; AFF1; YAP1; ZFP36L1; ZNF587; HMGB2; STAT3; IRF9; ELK3; ZKSCAN1; GATAD2A; TCEA1; SIAH2; BAZ1A; CREBL2; FOSB; TBX2; ASCL1; INSM1; SOX2; ZNF586