Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID49557	Trichostatin-a	GSE92742	HA1E	Human	24h	10uM	EID0244

Response Information :

Types	Number	Response transcription factors
Up-regulation	188	SSBP2; MYBL2; ADRB2; SPDEF; ATF3; ZNF195; NCOA3; PIAS1; STAT1; ZNF500; ZNF688; ZNF562; PBXIP1; ZNF304; MXI1; ZNF3; SAFB2; IRF9; ZNF573; ZXDC; CDK2; ZNF423; SALL2; GMNN; CBFA2T3; TCEA2; HEY1; ZKSCAN4; ZSCAN32; THRA; CALCOCO1; NR5A2; CREG1; TDP2; SMARCD3; HBP1; NR2C1; ZNF91; ZNF257; SIRT7; IRF6; INSR; JUP; LZTR1; TCEB2; CD3D; ZKSCAN1; RNF141; ZNF117; SUMO1; ZNF586; PIAS4; ZNF415; SOX9; HMBOX1; ZNF44; DNMT1; ZNF665; NOC2L; SPIB; CBX7; TOB1; EP300; ERCC3; HIC2; PEG3; RRN3; ZNF557; HHEX; CBX4; SRCAP; ZNF354A; ZNF273; ZNF34; ZNF331; ZNF224; ZNF264; REL; ZNF544; IRF1; ZNF611; ZNF45; HIRA; ZNF222; IRF8; LDB1; ZNF232; ZNF394; MYCL; THAP11; SOX3; RUVBL2; NR3C2; ZSCAN18; TP63; MYCBP; IRF3; E2F5; TOX; BRD4; SSBP3; L3MBTL1; SIX6; HINFP; RUVBL1; CERS6; ZNF623; ZNF12; THAP7; ARID1A; TRIB3; CDIP1; E2F6; THAP10; SOX4; ZNF180; NFE2L3; TRIM22; ZNF136; ST18; PAX5; HEY2; ZNF551; ZNF654; ARID5B; OSR2; ZBTB16; ZNF329; ZNF211; ARNT2; ZNF468; GATAD2A; FOS; SOX13; ZNF266; ZNF350; AHR; ZKSCAN5; JUNB; HOXD1; DDIT3; E2F8; NFE2; TCF7L1; INSM1; CITED2; ZNF593; HDAC1; NEUROD1; MEIS2; IRF7; ZNF268; TERF1; ZNF711; TGFB1; ZNF200; MYBL1; TFDP2; ZNF43; PAX6; TCF7; MAF; RUNX3; ZIC3; AEBP1; HES1; ID1; IKBKAP; NR2F1; NANOG; LITAF; CERS4; HDAC9; ZNF281; JUN; TSC22D1; TFAP2C; CREM; NKX2-2; ID2; NR0B1; ZNF165; POU2AF1; ZNF274; PBX1; HMGN3; NR4A2; TOX3
Down-regulation	212	TP53; LOXL2; FHL2; NUP62; NRIP1; PDLIM1; HOXA10; NFKBIA; ATF1; PAX8; PCBD1; PTRF; SMARCA4; CCNA2; GABPB1; FOSL1; DDX17; MTDH; NFKB1; REST; VGLL4; ATF5; PUF60; WHSC1; HNRNPD; HDGF; SMAD3; RARB; RFX5; CENPF; NCOR2; EDF1; DEK; KDM2A; HOXB9; TRIP6; PHF2; BHLHE40; RBM14; PATZ1; USP22; ZMYND11; ZEB2; TGFB1I1; BTF3; PRRX2; SETD2; PMF1; SIAH2; ZBTB38; CCDC59; CBFB; BRD3; NFE2L1; EWSR1; STAT6; TCF12; FLNA; SCMH1; TADA2A; SMARCE1; BAZ1A; YAF2; ZZZ3; ZNF236; REPIN1; ASXL1; HMGB2; BATF3; ELK3; IRF4; DDX54; PML; KLF12; XBP1; TCERG1; SP3; SFPQ; CHAF1B; HOXC6; HOXA11; IFI16; GTF2IRD1; NPM1; RBL1; RELA; PPRC1; DPF2; LMCD1; ETS1; BASP1; SNW1; ZBTB1; VEZF1; HOXD9; SMAD7; NCOA6; MSC; TRAK1; ZNF282; UBP1; BMI1; CHD3; SMARCA2; CREB3L1; MEIS1; HOXA7; NR3C1; MYC; EP400; RFX7; ZNF672; NCOA4; ZNF516; NCOR1; ERBB2; ARNTL2; POLR2A; HOXB6; ENO1; USF2; MBD2; STAT5B; PBRM1; CENPB; LIMD1; BCLAF1; SMAD4; TBL1XR1; RBBP7; RUNX1; ZNF292; ZFP64; FOXD1; ADNP; NR2F2; MED1; NFYB; PSPC1; SUPT3H; HOXB7; HMGA2; NR1D2; FLI1; ATF4; FOSL2; ZMYM2; TFEB; HLF; TFDP1; NFAT5; TBL1X; KDM5B; SALL1; SMAD2; PTTG1; SMARCC1; TRIM32; NFIB; BRD8; STAT5A; NPAT; TAF1D; MECOM; RAN; ZNF532; E2F3; MAFF; HMGB1; FOXM1; BCOR; KLF9; BATF; HIPK3; DNAJC1; AFF1; ANKRD1; CBX3; LPIN2; SIM2; ZFP36L1; DEAF1; CTBP1; FOXJ3; GTF2I; ING3; SAP30; RBBP8; NKX3-1; GTF3A; BAZ2B; MEF2A; HOXC10; BBX; SERTAD2; ID4; TGIF1; EGR3; KAT6B; RBPMS; PURA; TXNIP; TSC22D3; ERG; EMX2; SUV39H1; TLE4; PBX3; ZBTB18; HOXA5; HOXB2; ZNF131