Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID30230 Vorinostat GSE70138 NPC Human 24h 10uM EID0125
Types Number Response transcription factors
Up-regulation 498 PPARG; NFKBIB; TBX2; SATB1; FOXO4; TCFL5; ADRB2; EGR1; TP63; LHX6; SPDEF; BATF; SMARCD2; HTATIP2; NFATC4; NFIL3; VDR; HLF; PAX8; LIMD1; SSX1; JUN; HNF4A; STAT2; SATB2; MYT1L; RELB; CBFA2T3; ZNF556; GLI2; FOSB; PPARD; YBX2; FOXC1; DDX54; RUNX1; OSR2; FHL5; KLF4; ONECUT1; PRRX1; SPIB; EHMT1; DRAP1; POU2F2; HR; PAWR; EGR3; PIAS3; HEY2; OVOL1; TONSL; SOX30; POU3F4; SSX3; MAFK; RFX1; ING2; PPARA; DLX4; STAT1; MTA2; ZNF343; FOXC2; MLLT1; TAF4B; PAX1; ZNF696; ATOH1; HIC1; MLXIPL; TAF1; NR1H4; ZNF701; ZNF460; NEDD8; NR0B1; PAX7; ZNF212; ZNF557; HNF1B; MKL2; CREG1; NLK; NKX2-8; LHX5; ZNF446; GRIP1; PKNOX1; SRCAP; CAMTA2; NKX2-5; ZNF205; LMX1B; MYF5; AFF3; ESR2; ZNF507; SIAH2; RBBP5; SIX5; SND1; TOX4; HOXC5; ELF5; CREB3L1; TLE2; ZNF157; SOX1; ZSCAN2; SNAI1; NEUROG1; LYL1; KLF15; MNX1; ERCC2; ZNF492; TBX4; KLF5; TAF7L; PRDM9; SCAI; ING1; ZNF80; DLX6; LHX1; ZNF407; IKZF3; CRX; SIRT7; NFATC1; ALX4; HNF1A; TSHZ2; KLF12; TCF15; ZNF324B; EPAS1; TFCP2L1; DOT1L; MSX2; OVOL2; EBF2; EN2; SP140; VHL; TFAP2B; NR1D2; GBX1; MYT1; FOXD3; MED31; NPAS1; EVX1; ZBTB7B; FOXP3; HOXC11; ASCL3; SNAPC4; SP4; ETV2; MAPK8IP1; EMX1; POU3F1; TULP1; ZHX3; ZBTB20; FOXG1; HNF4G; SMARCD3; ZNF41; PAX4; FOXL1; DNAJC1; SSX7; PAX3; HABP4; HDAC7; HIVEP2; POU3F3; PITX3; POU4F3; NRL; PAX2; TBX6; SUV39H1; HDAC11; ASH1L; HOXC13; MTF1; ZNF225; MDM2; GSC2; EGR4; AATF; ZNF440; GFI1; HOXB1; ZNF224; ZIC4; ZNF780B; MAML3; IRF1; ZNF81; ZIM2; KMT5A; CHD2; ZNF549; POU4F2; ZNF234; ZNF493; ZNF749; HES2; RORC; ONECUT2; TSC22D4; MDM4; ZNF226; ZNF674; SCRT1; WHSC1L1; PRDM8; BRDT; TRIM16; TBX10; ZSCAN32; ZNF835; ZNF550; NR5A1; TBR1; SHOX; IKZF2; TLX2; AHR; GCM2; ALX3; LBX1; CIITA; ZNF34; ZNF471; SP1; NFKB2; MYOD1; HMX1; LMCD1; ASCL2; ZXDB; GTF2A2; TEF; VGLL1; SMAD9; SERTAD2; HOXB8; PARP1; CDK7; PRDM5; ZSCAN5A; HMGXB3; OLIG2; POU1F1; CBX7; ZNF324; FOXA1; ZNF814; TADA2A; RBPJL; TBX5; PAX5; SRY; POLR2A; HOXA3; CDX4; SMAD2; KMT2D; TP73; ELK4; FOXA2; HOXD12; FOXI1; NFAT5; RFX2; TULP2; ZBED2; FOXE3; TOB1; FOXB1; CRYM; ARID5A; TFDP3; SNAI2; BAZ2A; RCOR1; NEUROD2; ZNF221; DMTF1; BARX2; MYEF2; KLF13; RAX; AIRE; ZFHX2; RORB; LHX2; MXD1; PPARGC1A; HEYL; NR3C2; NR2E1; PRDM12; ZNF165; WNT4; NACA2; ERCC3; CSDC2; ZNF391; PRDM13; ERF; MYOG; TFE3; TAF6; PML; TFAP2C; CCNT1; EN1; JUNB; DBP; GATA1; DYRK1B; POU6F2; RFX3; IL16; ARHGAP35; NR4A2; DCC; EHF; CEBPE; IRF2; MITF; DMRT1; POU2F1; MED25; SHOX2; SUPT6H; CEBPB; HOXA6; NEUROG3; NFYA; THRB; HIVEP3; ZNF286A; ZNF208; NR6A1; UTF1; TLX1; MED15; FOXH1; GFI1B; IRX5; VENTX; ZNF510; ZBTB32; ZNF512B; ZNF816; POU6F1; ANKRD1; HSF4; NFIX; ZBTB44; EYA3; SOX18; NKX6-1; NEUROD6; ZNF362; SOX21; ZBTB7C; HOXD13; PIAS2; IKZF4; PGR; ZBTB7A; POU2F3; DLX5; POU2AF1; NR1H3; ZNF345; ZNF75D; NR1I3; NR4A1; TCEB2; BCL11B; PROP1; HHEX; NEUROG2; ZNF394; AFF2; FOXN2; GRHL2; MBD2; FEZF2; POU3F2; ZNF506; GATA4; ZFHX4; CBL; MAX; VSX1; SIX6; MSC; TCF3; ZNF154; NANOG; SOX14; IRF6; RNF14; MYBL1; SUPT4H1; ZNF214; MEOX2; GABPA; MNAT1; LPIN2; TGIF1; TAF5L; HAND2; FOXN1; WWP1; ZNF652; TRIM29; TRPS1; MSX1; ZBTB16; MAFB; RNF141; MYCBP; ZNF623; CREB5; FOXJ1; SOX9; FOXF2; CNOT3; MAK; MNDA; CREB3L2; CDIP1; E2F2; CREM; ELF3; CARF; TBX1; CDX1; GTF2F1; GATA3; BACH2; RORA; SIM2; AFF1; NFE2L2; FOS; RBL2; HSBP1; PURA; ZBTB3; PRDM2; BNC1; HOXC4; HDAC4; BASP1; TGFB1; HOXC10; HEY1; HLTF; MYF6; NPAS2; KLF9; NR5A2; PPP1R13L; ESR1; XBP1; SIX1; AEBP1; EYA2; MEOX1; KLF6; IKBKAP; ATF3; TXNIP; BTG1; FOSL2; ETS2; ERBB4; HOXC6; HOXB7; TBX3; NFE2; NR3C1; MTA1; TRIB3; NFATC3
Down-regulation 282 ZMIZ1; HMGA2; NUP62; ZNF146; EED; CREB1; PCBD1; HNRNPD; DEK; VPS72; CTBP2; ZNF302; TCERG1; NONO; FOXJ3; MED17; ZEB1; HDAC2; CCNA2; MYC; KLF7; APEX1; BRCA1; ZNF140; MED24; ZNF84; CRK; SMARCE1; SMAD4; ZNF32; PSMC3IP; SMARCA4; RBM39; GCFC2; ATF4; SSRP1; CNBP; SALL2; NR2F6; CNOT6; USP22; TGIF2; NRIP1; ARL2BP; ATF6; PBX3; ZSCAN18; WIZ; BTAF1; ZNF532; TCF12; RAN; UBE3A; ZNF268; GTF2IRD1; BRD7; BAZ2B; HMG20A; HDGF; MYNN; PIR; FOSL1; ZNF43; PBX1; BRD3; MED6; SMARCC1; CERS6; C1QBP; ZNF189; RFC1; TULP3; ILF2; CTCF; CBX3; PLAGL2; MYCN; HIRA; TRAK1; URI1; BIRC2; TAF11; PHF20; PATZ1; ZFP64; CSDE1; ZBED1; SF1; ZNF202; THAP10; SMAD6; FOXM1; ZBED4; WHSC1; HMGB1; SALL1; ATF2; HIVEP1; SFMBT1; HIF1A; SCAND1; ZNF227; SP3; RBPJ; RFXANK; NFKBIA; CCDC59; NPAT; MNT; RB1; ZNF274; KAT6B; ZNF669; RNF138; PMF1; BRD8; ACTL6A; PEX2; MYBL2; YEATS2; SMAD1; MXI1; ZNF529; PHF2; RNF111; BLM; EHMT2; CNOT1; ING3; IFI16; ZNF83; TTF1; ZNF432; ZNF606; ATF7IP; PRDM4; MGA; KAT2B; HMGXB4; GLI3; ZNF266; SLC2A4RG; MEIS2; MYCL; TFAP2A; ENY2; CDC5L; ZNF222; TFDP1; HMBOX1; GMNN; ARID1A; PPRC1; NPM1; FUBP1; ZFP30; PBRM1; ZNF3; SUMO1; TOX3; CBFB; YEATS4; SCMH1; ADNP2; FOXO3; TBL1X; PSMC3; ERBB2; HMGN3; NCOR1; RSF1; MED4; ZKSCAN1; DEAF1; E2F5; ZZZ3; ARID4B; ZNF331; CEBPG; VEZF1; ZNF93; ZNF232; TOPORS; ZIC1; XRCC6; TAF9B; CHD9; MAGED1; HDAC3; ZBTB18; CHD7; ZNF131; NR2C1; YBX1; SOX17; ZFP36L1; FOXJ2; TCF7L2; C1D; NFKB1; CARM1; TP53; ZNF45; ISL1; ZNF589; SSBP2; COPS5; TRIM24; SIX2; TGFB1I1; ZNF329; DAXX; MECOM; PIAS1; HDAC9; ZNF665; ZNF107; ZNF415; CBFA2T2; PQBP1; PAXBP1; FLI1; ZNF10; NR2F2; RAD21; ZNF423; EYA1; HOXD3; ID1; LEF1; CBX5; TFEC; ST18; ZNF195; PHIP; ZNF134; PNRC1; SOX11; WT1; JAK2; SOX2; BCLAF1; ZNF160; ASCL1; ATF5; YAP1; ZNF573; RBBP4; FLNA; ZNF587; BCL11A; RYBP; KLF11; TBL1XR1; LOXL2; ZNF468; REPIN1; ZNF22; ZNF551; IRF7; ZNF91; ID3; TDP2; HMG20B; PEG3; ZMYND8; TLE4; NFIC; NR2F1; GATA6; FOXF1; ZFPM2; ZMYM2; DACH1; INSR; SMAD3; MEIS1; KDM5D; EMX2; PSIP1; THAP11; HES1