Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID29824 Pf-03758309 GSE70138 NPC.CAS9 Human 24h 10uM EID0129
Types Number Response transcription factors
Up-regulation 451 TP73; PPARG; EMX1; NFKB2; ZNF778; ELF4; ZNF394; MEF2C; CAMTA2; RBPJL; TSC22D3; CHD2; SNAI2; HOXA5; THRB; ZNF154; HIPK2; NFATC4; CBX4; ELK4; TBR1; EYA3; HOXB1; ASH1L; ZNF816; GBX1; JUN; RFX1; NPAS2; PRDM14; LHX3; ZNF264; CDIP1; TULP1; VENTX; ESRRA; ZNF324B; ZNF771; FOXA2; MYNN; FOS; ZNF324; TSHZ2; MLLT1; ZNF221; CCNH; ZIM2; NR1H3; MAML3; ZNF549; CIITA; NRL; RORC; NFKBIB; CEBPA; PDX1; WHSC1L1; PAX3; ZNF701; PAX7; ZNF225; SCRT1; SOX21; RAX; PPP1R13L; HOXC5; TBX1; ZNF136; ZKSCAN4; ETV3; TEF; ATOH1; ZNF33B; KLF15; ZNF215; TULP2; PROP1; CEBPB; ALX4; CARF; BNC1; ZBTB43; TAF4B; PPARA; FOXL1; MNX1; HOXA4; HDAC11; ZNF550; HOXA6; ASCL3; DOT1L; HES2; ZNF391; KLF9; ETV2; SOX13; PPRC1; TFAP2A; TBX19; NEUROD2; HNF4A; TAF1C; ERBB4; GRIP1; ZNF362; FOXB1; ATF7; ZNF780B; ST18; ZNF223; BRF2; ZNF507; DLX4; MBD4; ZKSCAN8; PKNOX2; ONECUT1; NR6A1; NEUROG1; NOCT; FOXC2; STAT5A; FOXE3; FOXH1; TFEB; TAF1; NKX2-5; MED31; TRIM33; TBX5; ZNF814; BRD4; FOXF2; BCL11A; ESR1; ZNF304; HOXB8; TFDP3; CBFA2T3; FOXD3; FEZF2; KLF13; IRF9; RFX3; COPS2; NR5A1; ZNF408; SP1; POU6F2; ZFP36L2; PITX3; SRCAP; ANKRD1; PRDM9; RARG; NFATC1; ZXDB; ZNF132; SIX6; PAX1; ZNF442; ZNF345; ZNF749; TFCP2L1; AFF2; IRF6; TAF5L; MAFF; MKL1; CDX4; MDM2; ZNF407; NR2E1; VDR; CDX1; SSX7; HHEX; SPDEF; TUB; ZNF224; SOX14; NEUROG2; MYF5; ZNF682; ZNF343; TFAP4; MYRF; GSC2; SHOX; ZNF471; ZNF695; NHLH1; HOXD1; GATA1; ZNF593; NPAS1; ZFHX2; HNF4G; TRAK1; CBX2; ZNF34; SOX17; CCNT1; HESX1; WT1; ZNF787; IKZF1; TLX3; ACTL6B; ALX3; POU4F3; ZNF354A; NR5A2; ZNF668; IKZF3; MECP2; SOX18; RING1; SNAPC4; LBX1; MITF; CEBPE; MYC; DCC; NEUROG3; ZNF239; POU2F3; SPIB; ZNF460; TAF6L; OVOL2; ZNF8; SOX1; IKZF2; ZNF155; SP4; TBX4; ZNF75D; ZSCAN2; ZNF195; SOX5; CEBPG; PRDM12; LMX1B; EPAS1; HNF1B; ZNF331; LDB1; ZNF222; IRF1; AHR; LZTR1; ZNF81; ZNF124; KLF11; ZNF44; SMAD7; ZBTB44; SRY; POU1F1; ZNF175; SCAI; NR0B2; HIC1; ZNF415; PAX4; ZNF500; ZNF544; ZNF536; ZBTB7A; ZNF41; ATF3; LHX6; CSDC2; IRF8; HOXD12; PCGF1; ZNF214; ZNF133; PTRF; ARNT2; TAF5; WWP1; TCEA2; ZNF350; LITAF; LHX2; TRIP11; KDM4C; POU2AF1; E4F1; TDP2; SKI; HOXD3; ZNF580; OVOL1; BRDT; HLX; ZNF440; ZXDC; ONECUT2; ZNF675; VGLL1; MECOM; CREB3; TTF2; IL16; WNT4; HOXB13; SKIL; PRDM2; SOX10; ZNF80; MXD1; HOXD13; RELA; NEUROD1; ZNF576; NR1H4; ZNF652; CNOT3; HDAC9; AIP; ARHGAP35; SUPT5H; SSBP3; ATN1; ZNF623; SIN3B; NKRF; CD3D; MED15; MBD2; HIVEP1; TGFB1I1; CBX7; HSF1; FOSB; ZIC3; ZNF688; RUNX3; CALCOCO1; EN2; FOXJ2; RXRA; TAF4; CAPN15; GRHL2; TGFB1; ZNF467; BCL3; PRDM10; PBX2; TRIB3; HOXD11; CREB5; ARID5B; JUND; NFE2L2; SP100; PHF1; BRD2; ETS1; ZHX2; BNC2; ZNF165; NR1H2; STAT4; LMCD1; AGO2; BAZ2A; ZNF83; GON4L; SP140; EMX2; HOXA11; YBX3; AR; PAX5; ZBED2; LYL1; ZBTB16; THAP7; RARA; BHLHE41; ARID5A; BACH2; RXRG; SERTAD2; MXI1; TBX2; EN1; TRIM22; HTATIP2; ZFHX3; ZFPM2; TGIF2; STAT6; CUX1; SMARCD3; DAXX; JUNB; PITX1; EHF; OSR2; GATA6; TFEC; ZKSCAN1; NFE2; MNDA; PGR; JAK2; KDM5D; NFAT5; NCOA2; CEBPD; MEOX2; CRYM; NR4A2; WWC1; TCF7; CREB3L1; INSM1; TCF21; ABL1; RBPMS; SATB2; PAX6; NFE2L3; ZNF91; DLX5; KLF4; MYBL1; CCNE1; CITED2; PIR; NANOG; TOB1; CREB3L2; ZBTB20; SOX9; MEIS1; CALR; HIRA; ZFP36L1; HOXB2; IFI16; HOXA10; GATA2; PEG3
Down-regulation 194 HMGA2; EZH2; HDAC2; ATF1; SMARCC1; HNRNPD; BRCA1; RBBP4; GTF2A2; SOX4; BCLAF1; CCNA2; USP22; DEK; BRD8; PATZ1; ENO1; TBP; NEDD8; HDAC6; ZNF146; RUVBL1; SFPQ; TCF12; BMI1; SMARCE1; SMARCA4; SOX2; SNW1; MAGED1; BLM; SMARCA5; HMGN3; HMGB1; SUMO1; TBL1XR1; SP3; UBE2I; ZNF292; TBPL1; CBX3; BRD3; TCERG1; DDX5; CBX5; HLTF; TAF12; EED; CBFB; NPAT; ITGB3BP; MED4; RHOA; SUZ12; VEZF1; AFF1; VGLL4; HDAC1; WHSC1; ETS2; TCF4; HMGB3; HSF2; HMGB2; BIRC2; NUP62; ETV1; CARHSP1; PSMC3IP; ARNTL2; NONO; ELK3; ATF7IP; DDX17; ZNF302; RBM14; NELFB; PBRM1; CEBPZ; LPIN2; ZNF84; PMS1; HMG20A; CHAF1B; RNF4; NCOR1; CENPF; TRIM32; HSBP1; MED7; EWSR1; ZNF217; CRY1; EDF1; RAN; UBE2B; ING3; ZMYND11; SAP30; PMF1; TAF7; MED21; RBL1; SSRP1; FOXJ3; GTF2IRD1; NFYB; TAF9B; C1D; HDGF; USF2; YAF2; ACTL6A; DNMT3B; NCOA1; CNOT1; CCNC; FUBP1; TBL1X; CREBZF; ORC2; CDC5L; RBBP7; REST; RFX5; CTNNB1; SMAD5; HES1; ING2; RNF141; PHF20; MED6; RBM39; PRKDC; TGIF1; ECD; HOXC6; MAZ; TLE4; EYA1; PQBP1; PSPC1; YWHAB; PBX1; MNAT1; JARID2; CTBP2; ZBED1; TRIM28; FOSL2; MGA; TRRAP; BAZ2B; ZSCAN18; BRD7; KAT7; TRIM24; CHD7; BCL11B; HEY2; DR1; ID3; ID2; MSX1; CTR9; CNOT2; ADNP; ZMYND8; SOX11; XRCC6; RCOR1; MTF2; TOX3; TCFL5; IKBKAP; MKL2; SMAD1; PTTG1; ASH2L; BASP1; LOXL2; SIAH2; PBX3; ZMYM2; MYB; NFIB; ZBTB18; TSC22D1; HOXB6; PUF60; ZIC1; LEF1; SUV39H1; DACH1