Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID29751 Kin001-055 GSE70138 NPC.CAS9 Human 24h 1.11uM EID0128
Types Number Response transcription factors
Up-regulation 46 PCBD1; STAT3; BHLHE40; RHOA; IKBKAP; DRAP1; GLI2; RXRA; MED13; ARID1A; MED15; JUNB; SUB1; MED24; TRIM16; MED1; IRF2; SIAH2; CREB3L1; HOXB6; IRF8; HMG20B; BATF3; HOXA11; ETV5; NCOA3; AR; NFE2L3; CREB3L2; SOX11; ZBTB20; KDM5D; ZBTB38; SSX1; EMX2; VDR; SMAD7; EGR2; MSX1; IFI16; PPARG; TOX3; SOX9; TRIP6; RBPMS; SATB2
Down-regulation 47 USP22; RB1; HMGA2; CCNH; TP53; FUBP1; TFDP1; SFPQ; BRCA1; RBM39; PHF20; HSBP1; DDIT3; HOXD1; KLF3; ENY2; SOX10; HMGN3; DMTF1; ISL1; SMARCE1; PSIP1; ZNF165; ZNF721; WWC1; CTBP2; MEIS1; NAB1; NFIB; PPARGC1A; TBPL1; TOB1; ID1; TCEA1; SCAND1; TOX; TRIM29; ARNT2; PBX3; PQBP1; ELK3; BHLHE41; ZNF423; SMARCA2; ASCL1; ATF3; KLF5