Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID29596 Cgp-60474 GSE70138 NPC.CAS9 Human 24h 3.33uM EID0128
Types Number Response transcription factors
Up-regulation 462 EGR1; NFKBIB; NR1H2; NFKB2; REL; IKZF1; EMX1; GATA2; NFATC4; ZBED2; CDX1; CAMTA2; PPARD; KAT2A; HSF4; TP73; EYA3; NEUROD6; ZNF331; ATOH1; ZNF362; ZNF239; BAZ2A; HMX1; CHD2; ESRRA; PROP1; HOXC5; MZF1; TBX19; ZXDC; LZTR1; ZNF215; HOXA6; CCNH; CBX4; NR1H4; ZNF83; HIVEP1; PRDM2; RXRB; HSF1; HESX1; RFX1; NR6A1; HOXA4; NHLH1; ZNF224; TULP1; RARG; ARHGAP35; PHOX2A; HNF4G; TAF1C; TCEA2; CNOT3; ZKSCAN3; MED15; IRF6; PHOX2B; GLI1; SOX18; MAML3; SNAPC4; ZNF814; TLX2; FOXB1; E2F4; ZNF154; ETV7; NEUROD4; NR5A1; STAT2; CALCOCO1; ZNF343; HDAC5; HAND2; TBX1; ZFHX2; HOXA3; ZKSCAN4; ZNF335; LMX1B; TONSL; ETV3; HR; RING1; CIITA; PDX1; FOXH1; SPDEF; PRDM9; BNC1; PRDM10; CEBPE; FOXJ3; ZBTB48; ETV2; HIF3A; NPAS1; SIM1; TBR1; CREB3L2; ZNF536; HEYL; ONECUT1; TGFB1; ZKSCAN8; POU6F2; NHLH2; ZBTB20; ZNF384; E2F2; NEUROD2; ZNF771; NEUROG2; FOXN1; LITAF; RFX3; DOT1L; IKZF4; NKX6-1; PHF1; SNAI1; IRF9; SRCAP; IKZF3; NKX2-5; SP140; POU3F3; HOXD3; ZBTB44; KDM4C; MYC; SETDB1; HNF1A; MAP3K10; ACTL6B; TBX4; EZH1; ZNF345; ASCL3; TBX5; GBX1; FUBP1; CIC; SUPT6H; TAF4B; ZNF33B; VENTX; TEF; IRF3; ZNF710; FOXO4; PRDM8; PAX8; HOXC8; CBX8; ZSCAN2; PRDM14; FEZF2; PPARA; TAF6L; GCM1; TFEC; FOXF2; APBB1; NKRF; TULP2; RBPJL; THRB; TFAP2A; HOXA5; TLX1; SUPT3H; TCF20; ZNF264; CCNT1; ZNF500; SUPT5H; NOC2L; MAFK; IRF1; SSX7; FOXL1; ZNF133; ATN1; ZNF682; ZNF74; PBX2; ZBTB7B; MLLT1; SPI1; MAK; TFEB; ZNF155; DRAP1; VDR; TSHZ2; ARNT2; TULP3; MED25; MYOG; WHSC1L1; FOXD3; TBX10; POU2F3; HOXB1; ZBTB7C; SCRT1; SREBF2; TRIB3; KMT2B; ZNF34; HNF1B; ZNF205; LBX1; NR4A2; PAX2; SNAI2; CARF; ZNF556; NEUROG1; PAX7; GSC2; CEBPB; TLX3; VGLL1; ZNF75D; HOXC4; SSBP3; WNT4; ALX4; ZNF507; SAFB; LHX3; MEF2D; EMX2; MYBBP1A; SOX14; ASCL2; EVX1; CD3D; ZNF692; GFI1; GRIP1; PNRC1; CDIP1; PITX3; TFDP3; SLC2A4RG; NR5A2; HIPK2; RAX; RORC; PAX6; ZNF195; ZNF506; ZNF695; NR4A3; PPP1R13L; AIP; TAF1; RFX2; FOXC2; STAT6; MYF5; POU2F2; NR0B2; PRDM12; ZNF529; TFAP4; ZNF816; MNX1; FOS; POU4F3; E4F1; ZBTB7A; HAND1; THRA; GCFC2; HNF4A; ZNF91; HIVEP3; IRF7; PCGF1; CBFA2T3; SOX21; TCF15; CALR; EHMT2; BACH2; ZNF768; FOSB; FOXA2; ZNF835; DLX2; ZNF165; HDAC11; NFE2L2; HMGA1; ZFPM2; HIC1; MBD4; BCL11A; ASH1L; BTAF1; MXI1; POU2AF1; ZEB1; CRTC1; NEUROD1; TEAD3; AIRE; KLF9; SOX17; NR4A1; ZHX2; HOXB5; BARX1; HDAC7; ZNF131; PRDM1; HOXB3; MYRF; CBX7; MYBL1; CAMTA1; ZBTB17; ERF; NAB2; ST18; OSR2; ZNF219; HLX; DLX4; HDAC9; ZNF665; SP100; HOXB2; EPAS1; ETV6; PAX1; HMBOX1; IRF8; MEIS2; SAFB2; LDB1; NR2C1; FOXI1; MAFF; KLF7; DAXX; PITX1; MTA1; WWC1; CEBPG; CDX2; ARID5B; ZNF337; KDM5C; KLF13; TGIF2; CSDE1; ZNF580; ZNF44; POU4F2; ZKSCAN1; RBFOX2; WT1; HBP1; SMARCC2; TTF2; DACH1; ZFP36L2; MEIS1; ZNF467; POLR3C; MDM4; ZNF528; STAT4; AES; ARID5A; PTRF; SKI; ZNF117; MKL1; CREB5; HLF; HOXD1; FLI1; YBX3; VPS72; SOX5; CNBP; IRX4; KLF4; L3MBTL1; CREBZF; HOXA11; TCF21; TFCP2L1; TCF7L2; ESR1; MECP2; BRD2; OVOL2; PRMT2; TWIST1; JUP; ZNF354A; TCF7; ATF3; ZNF551; RORA; TULP4; KAT6B; ZNF544; LHX2; PEG3; NR0B1; DBP; EN1; JUN; TRIM22; CRYM; ZNF589; COPS2; GRHL2; SHOX2; CREG1; EHF; BCL3; BRD4; AR; NCOA2; BHLHE41; DMTF1; HTATIP2; AHR; RBBP8; HHEX; SOX10; BCL6; TSC22D3; JUNB; MAFB; ZNF423; ERBB4; NR1H3; MNDA; SATB2; KLF6; PLAGL1; NFE2L3; GATA6; MECOM; TBX2; SMAD7; FOXC1; MEF2C; CEBPD
Down-regulation 166 HDAC2; GTF2A2; RHOA; SOX4; THAP11; XBP1; NUP62; RBBP4; MAGED1; TBL1X; PUF60; BIRC2; HNRNPD; UBE2I; USP22; SOX2; SCAND1; SMARCA5; HMGA2; ECD; CCNA2; HSBP1; TCERG1; MED4; NONO; RNF4; BRD8; ASCL1; ATF1; SAP30; ADNP; PATZ1; CDK7; BCLAF1; KAT7; BRD3; TRIM32; SNW1; ABL1; NCOA6; DDX5; FOSL1; ING2; VEZF1; CRY1; ASH2L; ZBTB1; PCGF2; SSRP1; ZNF274; RAN; NFIL3; SFPQ; NRBF2; NELFB; HDAC1; NCOA4; CTCF; DNAJC2; DPF2; WHSC1; PBRM1; BAZ1B; CENPF; MED7; CDYL; ZBTB24; APEX1; EDF1; TAF7; ZNF443; DEK; MED27; PBX1; E2F6; FOXG1; REST; SMARCE1; ZMYND11; ZMYND8; NEDD8; ID4; MED1; HMGB3; ZBED1; JARID2; NR2F2; HSF2; ZNF84; ENO1; WDHD1; ZNF672; MED17; ZFP64; PHF20; MED6; ARNTL2; ZNF302; ADNP2; MED20; RBBP7; ZNF146; ZNF189; SETD2; NPAT; CARHSP1; TRIM24; AFF1; TBPL1; CBFB; BCL10; HES1; NCOA1; CTR9; SALL2; SP3; BATF3; BMI1; CBX3; REPIN1; PIAS2; BRCA1; HOXB7; TRRAP; YWHAB; SMAD4; RLF; RNF6; BATF; TCEB2; PSPC1; DDX17; NKX3-1; HMGB2; ARID4A; ING3; LPIN2; KLF10; FOXO1; EGR2; DNMT3B; TAF9B; ISL1; PIR; CTNNB1; TLE1; RNF14; SIX1; IRF2; SIAH2; PSIP1; HLTF; HOXC6; ZNF217; MYB; ZNF24; PRKDC; ELF5; SMAD1; HEY1; TOX3; BASP1; SPEN; SUV39H1; ID1; PPARG