Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID29370 Cgp-60474 GSE70138 NPC.CAS9 Human 24h 0.37uM EID0127
Types Number Response transcription factors
Up-regulation 358 EGR1; IKZF1; EPAS1; SOX17; HOXC5; HSF1; RFX1; HOXA4; EMX2; PROP1; HOXA5; TULP1; NFKBIB; HOXA10; GBX1; CRX; SSX7; SCAI; HNF4G; THRB; NEUROG1; TLX2; TEF; AIRE; ZNF154; HOXA6; ZNF816; TBX1; SCRT1; TP73; PRDM9; LZTR1; VENTX; PRDM2; ZNF224; HNF1A; NFATC4; PRDM12; CBX7; ZNF771; HIC1; EMX1; PPARA; TBR1; PRDM16; PDX1; ZNF343; MLLT1; PHOX2A; HOXA3; HOXD12; SIM1; TFCP2L1; FOXD3; ALX4; ZSCAN2; HNF4A; RBPJL; FHL5; ZNF536; FEZF2; NEUROD4; NEUROD2; ZNF345; NR5A1; ACTL6B; ZNF512B; MECOM; ZNF362; FOXL1; SOX18; NEUROG2; ZNF814; FOXC2; SOX14; MEF2C; CEBPB; LBX1; ZNF74; MAML3; POU6F2; DOT1L; PAX7; PAX8; MYBBP1A; CNOT3; PTRF; ESR2; TBX6; ETV2; HOXC4; NPAS1; PRDM14; ZKSCAN8; CHD2; PAX3; GSC2; HAND2; GRIP1; HOXB8; ZNF221; MYNN; ING4; ETV3; ZNF835; OSR2; ZNF471; ZNF688; HEYL; NRL; ZNF749; PHOX2B; DRAP1; FOXB1; ZNF549; HOXD13; FOXL2; MAFK; TCF7; POU4F3; TAF6L; ZNF391; BNC1; ALX3; CIITA; MED15; LHX6; CAMTA2; CDX4; SMARCB1; TULP2; ZNF80; ZNF407; IRF6; ZNF157; IRF8; DLX4; CBX6; TFDP3; PAX1; TAF1; PDLIM1; ZNF701; NEUROG3; ESRRA; ZNF695; ZNF440; SNAPC4; ZNF41; TONSL; ETV6; ATOH1; POU3F3; TBX5; KAT2A; SUPT5H; NR1H2; ZNF780B; GCM2; VHL; VGLL1; ASCL2; ATF6B; IKZF3; CDX1; PCGF1; BARX1; EN1; TCEA2; WWTR1; ESRRB; POU2F3; NR0B2; ST18; PAX4; SOX1; POU1F1; TBX21; NFKB2; DLX6; SHOX2; PRDM10; MYRF; MSX2; YBX3; MAK; ZNF155; ZNF81; ZNF674; CALR; ZNF611; ZNF665; TAF1C; SOX21; TWIST1; BRDT; IRF3; DMRT1; HBP1; SHOX; TAF4B; HOXB1; TCF21; NACA2; DLX5; ZNF165; RXRG; FOSB; SOX10; SPI1; SIX6; ARID5A; ZBTB7C; NR0B1; HOXC8; NEUROD1; TFAP2C; TLX3; NFE2L2; SNAI2; SRCAP; HOXD9; SUPT3H; NR5A2; ZNF354A; EVX1; HESX1; AHR; CRYM; GTF3A; PRRX1; ZNF787; ZNF75D; MZF1; PNRC1; NFIX; ZNF768; SPDEF; CIZ1; WT1; IRX4; SREBF2; FOXF2; RARG; IRF1; MNX1; CEBPE; CDIP1; HNF1B; REL; FOXO4; MAFF; KAT6B; MKL2; NFIB; ZNF215; POU2AF1; DYRK1B; HLX; ZNF528; CAPN15; VDR; CBX4; LITAF; AIP; TGFB1; HIPK2; PLAGL1; HOXD3; TTF2; BCL11A; PAX5; OVOL2; ZNF593; HOXB2; EGR4; ELF4; BNC2; CBFA2T3; WWC1; ZFPM2; NR4A1; TLE2; TGIF2; SP100; TULP3; ZNF264; JUN; JUNB; HDAC4; FOXI1; HDAC9; SP140; ZSCAN31; ZNF580; STAT6; HOXB6; AES; FOXA2; TFEC; HOXB5; PAX6; WNT4; KLF4; NR1H4; RORA; MBD2; NKX2-2; GFI1; PRKDC; HMGA1; LYL1; TFDP2; FOS; HOXA11; NR4A3; CEBPD; ARNT2; HIPK3; ESR1; LOXL2; CD3D; ZNF423; EGR3; PITX1; HLF; ID1; BCL3; PQBP1; MITF; TRIB3; ID3; EHF; IRF9; HOXD1; FOXG1; ZFP36L2; BHLHE41; NR4A2; MSX1; TGFB1I1; INSM1; MYC; HIRA; HOXC6; HHEX; JUP; ZIC1; MAFB; HEY1; HOXC10; TCF4; ZBED2; MEIS1; ZNF91; ERG; TFAP2A; E2F2
Down-regulation 198 CCNA2; HDAC2; HMGA2; BIRC2; RHOA; SOX4; SPEN; SOX2; EZH2; NR2F6; TCERG1; GTF2A2; RBM14; HNRNPD; SNW1; NUP62; PUF60; RB1; BRD8; BLM; NPAT; KAT7; ATF1; TRIM32; AFF1; CTCF; ZNF143; CHD7; SMARCA5; ECD; PATZ1; JARID2; DMTF1; AATF; ATF6; MAGED1; TRIM27; ZBTB1; NFE2L1; PKNOX1; ID4; CBX5; WHSC1; BRD3; ZNF281; CLOCK; USP22; ARID1A; GTF2IRD1; RNF111; ADNP; BCLAF1; TBX3; MED4; PURA; ETV1; ZNF302; TBL1X; SMARCE1; ATF7IP; FOXA1; PCGF2; HMGB1; CENPF; MED1; DDX5; ASH2L; ZNF672; EED; PBRM1; ZNF443; ING2; TRRAP; PMS1; BAZ1B; ZNF146; E2F6; BRCA1; ZNF45; NCOA6; TOX3; ZBTB11; WDHD1; NCOA1; CNOT1; DPF2; DNMT3B; CHD9; ELF2; SAP130; NAB1; SUB1; REST; UBE2I; SETD3; CUX2; HMG20A; ARID4B; ZNF84; NLK; RNF4; HSF2; YWHAB; SMAD1; TCF12; VEZF1; CTR9; PHF2; FOXO3; CREB1; NFYB; MYB; ZBTB18; PSMC3IP; ITGB3BP; ZNF274; CDK8; RXRA; CRY1; RYBP; PSPC1; RAN; MED20; NRBF2; NFYC; RERE; ZNF189; CITED1; NKX3-1; RBBP4; MLX; BMI1; ZNF432; SP2; SALL2; PBX1; MED13; ZNF217; SAP30; BASP1; ZMYM2; YEATS4; RBPJ; MED6; HMGB3; PLAGL2; XBP1; SP3; ZBED1; AGO2; SMAD3; HSBP1; RCOR1; DEK; PIAS1; BRIP1; CBFB; TAF7; MYCL; ISL1; SMAD4; HES1; BACH1; ZNF24; SIX1; NCOR2; HMGB2; REPIN1; TOB1; SFPQ; SOX11; NR3C2; EDF1; MYCN; YAP1; RREB1; TBL1XR1; TRIM24; PBX3; ING3; ZNF22; PHIP; ASCL1; SMARCA1; ZEB2; CITED2; ZNF587; TRIM29; HTATIP2; HMGN3; ZMYND8; NRIP1; KDM5D; SUV39H1; NFATC3; IKBKAP; PEG3; ZNF586