Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID29369 Cgp-60474 GSE70138 NPC.CAS9 Human 24h 1.11uM EID0127
Types Number Response transcription factors
Up-regulation 321 EGR1; NFKBIB; NFATC4; NFKB2; NEUROG1; RFX1; CBX7; HOXA5; LZTR1; ZNF771; SUPT5H; TULP1; ZNF224; PROP1; GBX1; HOXA3; HOXA4; TAF1C; THRB; EMX1; CRX; CAMTA2; CDX1; HOXB1; HOXA6; MEF2C; ATOH1; NRL; ZNF75D; ST18; ZNF688; PRDM12; ACTL6B; TLX2; TBX2; PDX1; VENTX; IRF6; HDAC5; TP73; E2F4; RBPJL; HSF4; TBX10; HAND2; FOXB1; PRDM2; IRF3; TBR1; PBX2; BARX1; HSF1; IFNB1; SOX17; ZNF362; LHX3; ZSCAN2; CDIP1; ZNF611; ARHGAP35; TCEA2; ZNF154; ETV2; KAT2A; HLX; TWIST1; SNAI1; NEUROD2; FOXF2; PAX7; BNC2; TBX1; ZNF345; ALX4; VGLL1; ZBTB17; ZFHX2; FOXH1; HEYL; CBX4; CREB3L2; ZFPM2; FOXJ3; NR5A1; SOX18; CALCOCO1; NPAS1; PRDM14; ZIM2; HNF1A; PITX3; REL; ZNF440; DOT1L; TCF21; TEF; ZNF768; SCRT1; NEUROD4; MLLT1; EPAS1; MAP3K10; NEUROG3; HNF4A; HOXC5; MED15; PRDM16; MZF1; AIRE; TONSL; HIC1; CDX4; PRDM8; ZNF500; ZBTB20; LITAF; FOXC2; MECOM; NKX2-5; L3MBTL1; TEAD3; SOX13; ZBTB7B; PAX1; CEBPE; ESR2; NEUROD1; SNAPC4; NEUROD6; PRDM9; ZNF133; KAT6B; NKX6-1; POU6F2; HOXD12; PHOX2A; TLE2; CD3D; PAX3; ZNF665; CEBPB; PTRF; RORC; ZNF536; HIF3A; ZKSCAN4; IRF9; IKZF1; NEUROG2; MAFK; MYRF; DLX4; CREB3; SRCAP; ATN1; SOX21; MYT1; KLF15; TLX1; HDAC11; POU2F2; ZNF215; FEZF2; RFX2; MYBBP1A; AHR; ETV3; EMX2; CNOT3; NR4A1; TBX5; LBX1; SUPT6H; PRDM10; HOXC8; ZIC3; E4F1; SUPT3H; SHOX2; HIPK2; ATF3; SPDEF; SMAD3; ESRRA; MKL1; POU4F3; FOXO4; ZNF335; CHD2; TULP3; LDB1; EVX1; VDR; ZNF444; DRAP1; NR0B1; ZNF337; MAFF; SRY; NOC2L; NR0B2; WT1; IRF8; CALR; CBX6; AES; ZBTB16; IRF1; HAND1; KDM4C; SPI1; ZNF205; ESR1; TBX19; FLI1; ARID5B; LHX6; SNAI2; NFIX; BNC1; ZNF239; MXD4; NAB2; HHEX; TAF4B; PRDM1; ZNF354A; RXRG; SP140; ZNF264; TGFB1; MEF2D; POU2AF1; PHOX2B; SOX10; PAX6; WWC1; FOSB; PAX8; TRIB3; BCL11A; RARG; HOXB5; PHF1; IRF7; CSDC2; MYBL1; FHL2; ARID5A; OVOL2; ZNF44; BCL6; YBX3; NR1H2; PPP1R13L; PNRC1; HOXD3; ZNF544; HBP1; ZNF117; HDAC9; ETS2; DLX5; ZNF580; EGR3; PITX1; ARNT2; ELF4; ZNF331; CRYM; NR1H4; GFI1; RBFOX2; AR; ZNF83; FOS; HOXD1; NFE2L2; FOXA2; KAT2B; NFE2L3; MEIS1; ZNF721; WWTR1; EN1; ZBED2; KLF4; NCOA3; NR4A3; ZNF593; OSR2; MNDA; ZNF423; ZNF551; STAT6; HOXB2; HTATIP2; HMGA1; KLF9; PLAGL1; NR4A2; SP100; MYC; MSX1; ZEB1; TFAP2A; LMCD1; TFEC; MAFB; RORA; ZNF91; TGFB1I1; JUN; CEBPD; GATA6; BHLHE41; LOXL2; AEBP1; MEIS2; GATA2; TXNIP
Down-regulation 203 GTF2A2; CCNA2; HDAC2; RHOA; PUF60; ATF1; USP22; HMGA2; HNRNPD; BIRC2; SOX4; SOX2; TBL1X; BCLAF1; SNW1; BRD3; EZH2; ETV1; MAGED1; SMARCC1; ID4; ECD; DNAJC2; ING2; GTF2IRD1; RBBP4; NR2F6; SP3; TBP; DDX5; CENPF; PATZ1; CTR9; SMARCE1; NUP62; NCOA1; BRD8; TRIM32; E2F6; SSRP1; REST; TCF12; MED4; UBE2I; TCERG1; HSF2; SOX11; SMARCA5; MED1; NPAT; CNOT1; RNF4; PBRM1; VEZF1; HDGF; CEBPZ; CBFB; JARID2; NCOA6; ADNP; JUND; ZNF302; YAF2; TOX3; ZBTB40; SPEN; RNF111; DPF2; BLM; CTCF; ZNF672; ZNF146; PMS1; NKX3-1; ATF7IP; AATF; ZMYND11; KLF10; NFE2L1; KAT7; HSBP1; WHSC1; TAF9B; PLAG1; HDAC1; RBM14; REPIN1; RAN; ATF5; AFF1; CHD7; HMGB1; SFPQ; ZBTB1; PHF20; LZTS1; CITED1; BRCA1; BAZ1B; HMGB2; CDYL; SETD3; HES1; ASH2L; ZBTB11; ING3; ZNF45; TOB1; SUMO1; CCDC59; NRBF2; MED6; PCGF2; BMI1; MED20; PITX2; MED17; NELFB; CRY1; EDF1; SMAD5; ZNF274; NAB1; ISL1; TCF25; NPM1; ZNF189; SP2; RXRA; PURA; BRIP1; NR2F1; SETD2; PSPC1; PTTG1; BAZ1A; RNF138; SMAD1; MLX; ASCL1; MYB; ENO1; PBX1; ZBED1; NONO; SMARCA1; ZNF84; DEK; XBP1; PPARGC1A; SAP30; CREB1; ZMYM2; TCFL5; BATF; YEATS4; ZNF217; FOXG1; CHD9; MYCL; CUX2; PLAGL2; NR2F2; RNF141; FOXA1; LPIN2; APEX1; HMG20A; POU4F1; IRF4; DNMT3B; HMGB3; TAF7; BATF3; ZNF443; ZNF432; TULP4; TRPS1; ERBB2; SIX1; TRIM29; PBX3; SUV39H1; TBPL1; HOXC6; TBX3; TRIM24; STAT1; TSC22D1; ARNTL2; HMGN3; SOX9; ZBTB18; BASP1; HOXC10; IKBKAP; ELK3; RBBP8; THAP11; SSBP2; HEY1; ZNF586; KDM5D