Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID26315 Cgp-60474 GSE70138 NPC.CAS9 Human 24h 0.37uM EID0091
Types Number Response transcription factors
Up-regulation 575 EGR1; NFATC4; PAX8; GATA2; NFKBIB; NFKB2; RFX1; CCNH; PRDM14; CAMTA2; EMX1; IRF6; THRB; ING4; ATOH1; HNF4A; ZKSCAN8; CD3D; ZNF154; ALX4; TP73; RFX3; ZNF467; GBX1; CHD2; HOXC5; TULP1; SHOX; ZSCAN2; TEF; ZNF264; ZNF682; PROP1; MAFK; HNF1A; ZNF550; ZNF816; POU6F2; NEUROD4; E2F4; HIPK2; TAF4B; ZNF343; SOX5; AIRE; HDAC11; PRDM12; BNC1; LMX1B; DOT1L; ASCL3; ZNF155; ZNF345; MAML3; NEUROG2; ZNF507; ZNF221; PAX3; NFE2L2; ZFHX2; HOXA6; NR5A2; FOXH1; ZNF549; NPAS1; TBX5; IKZF3; EYA3; SIM1; ZNF75D; NEUROD2; ZNF695; ZNF225; HIVEP3; MLLT1; SNAI1; TBR1; NEUROG1; ZNF331; SOX18; VENTX; TFDP3; NKX6-1; CBX4; KLF15; ZNF780B; ZNF512B; SCAI; RORC; HNF1B; DRAP1; FOXB1; TLX3; CEBPA; ONECUT1; PAX1; HES2; ZNF471; HNF4G; ZNF778; SRY; VHL; TAF1C; FOXD3; ZNF391; ZNF324B; KLF13; NR6A1; ZNF814; ZNF749; SOX17; VGLL1; ASH1L; PRDM9; ETV3; ZNF132; NRL; ZNF215; POU3F3; RFX2; SCRT1; ZNF41; NKX2-5; SSX7; HOXD12; TLX2; PRDM16; NEUROG3; PAX7; FEZF2; CDX4; ZNF768; HOXB1; CDIP1; SRCAP; POU6F1; GRIP1; IRF1; ZNF407; PDX1; LBX1; RBPJL; LHX3; PRMT2; TBX10; TUB; FOXE3; ZNF701; ZNF440; HOXA3; TONSL; ZNF835; NHLH1; ACTL6B; SHOX2; ZNF674; ATN1; MAP3K10; ZNF214; PAX2; TULP2; POU4F3; ZSCAN32; ZNF80; HBP1; GLI2; ZNF157; NEUROD6; DMRT1; ZNF81; POU2F3; RORB; CDX1; ZNF444; HOXB8; EMX2; ZIC4; GCM2; ZNF544; HEYL; FOXJ2; FOXC2; POU3F4; DCC; TAF7L; CALCOCO1; ATF6B; KMT2D; TFAP2A; AFF3; CARF; CBX7; GSC2; SOX1; ESRRB; WNT4; HSF4; SSBP3; ZNF208; PPARD; ZKSCAN4; BARX1; ZBTB44; MYRF; SPI1; ZNF623; PRDM5; CBX8; ARHGAP35; SOX14; PITX3; TBX1; ZNF224; TAF6L; ZNF675; MECOM; GMEB2; ONECUT2; CIITA; FOXL1; GFI1; ZBTB7C; CNOT3; TBX6; RAX; ETV2; EPAS1; ZBTB48; CBX2; ZXDC; WHSC1L1; FOSB; ZBTB3; SP4; ZNF142; SPDEF; HOXC8; NAB2; ZNF33B; TBX21; IKZF2; MAK; ZNF442; TULP3; ALX3; E4F1; SOX21; LITAF; MSX2; RARG; VDR; ZNF484; HESX1; PAX4; RUNX3; GRHL2; ZNF175; FOXI1; ATF3; ESRRA; ZNF234; EZH1; SIX3; JUN; ZNF480; EHF; CEBPB; CRX; CEBPE; TTF2; TFCP2L1; ZNF239; SP140; BRDT; HDAC5; IRF3; FOXA2; ZNF335; KLF8; OVOL1; SMARCD2; BAZ2A; MED12; LHX6; MYF5; SKIL; TOX4; ZNF324; ZNF362; NACA2; NKX2-8; PRDM2; NR5A1; ARID5A; NR4A1; GBX2; ZNF254; CBX6; L3MBTL1; PRDM8; RBFOX2; CREB3L2; ZNF710; MECP2; RORA; PRPF6; PHOX2A; UTF1; ZBTB7B; TGIF2; ZNF688; ZNF536; POU1F1; WWC1; IRF8; HOXD3; DAXX; ZNF667; MDM4; RING1; HIC1; THAP9; MAPK8IP1; NEUROD1; ZNF771; PTRF; PRDM10; SNAPC4; ZNF350; TLX1; MYEF2; MBD4; ETV6; ZNF506; MZF1; PRDM1; CALR; STAT4; TSHZ2; SIX5; HINFP; CBFA2T3; SUPT3H; MED25; NFIX; SP1; BRWD1; ARID3A; LZTR1; ZNF460; ZNF500; WT1; NR4A2; MAFF; CREBL2; MNX1; HLX; OSR2; ZNF493; CRYM; THRA; ZIM2; STAT2; PPARA; PHF1; ZNF394; REL; ZNF257; HIF3A; ASCL2; IRF9; ZSCAN31; HOXA2; ZNF384; RXRG; TFEC; ZNF334; SLC2A4RG; PHOX2B; ZNF337; AIP; OVOL2; POU2AF1; ZNF528; ZFP2; GON4L; HOXC4; ZNF665; NR2C2; PBX2; FOXL2; TCF7; SUPT5H; ZBED2; BRD2; NOC2L; TGFB1; DLX5; ZNF557; MYT1; HMGXB3; KAT6B; FOXE1; ZNF629; CIR1; PML; PAWR; GATA1; LHX2; SOX12; ZFP36L2; ZNF606; HAND2; NR1H4; ZNF141; ZNF91; ST18; TCEA2; ZNF552; EGR3; MAFB; NFATC1; ZEB1; TRIB3; HR; MXD4; PCGF1; IFNB1; ZNF556; ZNF573; ZNF711; PNRC1; ZNF551; NR2E1; ZNF304; RXRB; FOXF2; MED15; AES; CDK9; ZBTB17; ZNF423; ZNF34; ZNF205; ELF4; SUPT6H; STAT5A; ERF; SKI; SAFB2; RSF1; CREG1; FOXJ1; ZNF611; BARX2; MKL2; MEOX2; FLI1; ZNF135; TAF1; JAK2; MXI1; ARNT2; NR0B2; AR; NFE2L3; WWTR1; GCM1; ERBB4; KLF3; TWIST1; YBX3; ZHX2; KLF4; PAX6; ZFPM2; AFF4; SNAI2; CAPN15; KLF9; ZBTB43; GCFC2; CREB3; CAMTA1; ZNF83; TXNIP; HSF1; POU4F2; EN1; NR4A3; HMBOX1; TCF7L2; YEATS2; HIVEP1; ZNF589; EP300; BCL11B; HAND1; ZNF652; PRRX1; BCL11A; POU5F1B; NHLH2; HOXB5; SOX13; ZNF117; HMGA1; PQBP1; TEAD3; TRIM22; SIN3B; KDM4C; KAT2B; GTF2I; GFI1B; HOXD11; DBP; SP100; BNC2; MYC; HOXB2; NANOG; CREB5; NCOA3; MNDA; TFDP2; LEF1; ZNF273; MDM2; ZNF44; ZNF426; NR1H3; CHD4; JUP; HHEX; AHR; STAT6; NFIC; IRF7; LOXL2; PDLIM1; ZBTB20; JUNB; TCF21; ARID5B; MEIS2; LIN28A; HDAC9; ZKSCAN1; TAL1; TLE2; BCL6; KLF6; BHLHE41; INSM1; FOXF1; HIRA; NFAT5; ETS1; HOXD1; TGFB1I1; ESR1; MITF; MEF2C; NKX2-1; CEBPD; ZIC1; ZNF165; CITED2; HLF; MYBL1; MTA1; E2F2; IKZF1; RELB
Down-regulation 192 HDAC2; CCNA2; ATF1; HES1; SOX4; NUP62; CRK; GTF2A2; TCERG1; EZH2; USP22; ETV1; XBP1; HNRNPD; CENPF; PBRM1; RBBP4; RAN; MAGED1; BRD8; NR2F6; TRIM32; BRD3; ASH2L; ING2; ZNF146; DEK; ZNF143; KAT7; PCGF2; VEZF1; BCLAF1; NCOR1; TP53; SCAND1; MED27; SMARCA5; BLM; SMAD4; SAP30; DNMT3B; RBM14; ITGB3BP; E2F6; CREB1; NELFB; AFF1; NCOA6; PSPC1; MED4; DDX5; SNW1; TCF12; RBBP7; JARID2; PATZ1; BMI1; CTR9; ZNF274; UBE2I; SFPQ; TBL1X; ENO1; CRY1; ADNP; SSRP1; BIRC2; BRCA1; CTCF; HMGB1; PHF20; SMAD2; NRBF2; TAF5; HMGB3; HSF2; HSBP1; BAZ1B; NAB1; ZFP64; NCOA1; RBBP8; ING3; ZNF443; ZNF672; PURA; AATF; ZNF189; MLX; CEBPZ; SSBP2; ECD; RNF6; MYB; PSMC3IP; MAML1; WDHD1; URI1; TLE1; ERBB2; RHOA; SOX2; ATF7IP; SMARCE1; WHSC1; ZBED1; NKX3-1; ACTL6A; TBL1XR1; CNOT1; TRIM27; ZBTB11; GTF2IRD1; MED1; EDF1; CDK8; HOXC6; NR2F2; EED; ZMYM2; CDK7; NONO; VGLL4; CDYL; PIAS2; BCOR; RNF14; ZNF432; RERE; PTTG1; TAF7; ZNF24; NPAT; PBX1; NPM1; PRKDC; CBFB; ZNF84; NCOA4; ID2; TAF9; IKBKAP; UBE2L3; TBX3; BASP1; CBX5; SREBF1; PLAGL2; SF1; HOXB7; PMS1; ARID4A; TBPL1; SMAD5; DDX17; NRIP1; CARHSP1; KAT6A; CHD7; BATF3; RLF; JUND; TSC22D1; MED13; ZMYND8; DNAJC2; RYBP; SIX2; KDM5D; ID4; SIM2; PBX3; SIX1; ASCL1; SUV39H1; RUNX1; TCFL5; ABL1; CITED1; LPIN2; HMGN3; SIAH2; PUF60; TLE4; BAZ1A; TRIM29; MAF; SPEN; POU4F1; FOXC1; FOXG1; NFATC3