Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID23802 Xmd-885 GSE70138 NPC.CAS9 Human 24h 0.12uM EID0055
Types Number Response transcription factors
Up-regulation 553 MEF2C; SUV39H1; IKZF2; PAX1; HIPK2; ANKRD1; MAML3; DLX6; DLX4; SSX7; ZIC4; ZNF770; TBX1; IKZF4; RFX3; ZNF446; CHD2; HOXA2; FOXD2; ZNF157; ZNF324B; ZNF493; EMX1; ZNF81; DLX5; ZNF154; TBX4; RBL1; PRDM5; FOXE3; ZNF221; PAX4; MDFI; BNC1; VHL; MSX2; ZNF701; PRDM9; IRF2; PAX2; ZNF814; POU6F2; HOXC5; FOXH1; IKZF3; KLF5; TULP2; LIMD1; FOXA2; GCM2; ESRRB; ZNF234; ZNF214; SRY; ZNF492; ZNF343; PAX7; ZNF225; ZNF41; PDX1; KMT2D; ZNF695; TLX3; ZNF471; HES2; NPAS1; POU4F3; POU2F3; HEYL; EYA3; NKX6-1; MED31; ZNF215; HDAC11; SCRT1; ZNF132; ZNF674; MED12; HNF4G; PRDM13; ZSCAN5A; NEUROG2; TP63; TCF3; FOXC2; POU6F1; NR5A1; ZNF442; VENTX; GFI1; TAF6L; ONECUT1; TUB; HMX1; CHAF1B; POU3F4; ZNF407; ZNF80; TFCP2L1; NR6A1; HOXB8; ZNF550; ZNF556; NFATC1; NOCT; GRIP1; PRRX1; ZNF780B; SPI1; TCF20; NFE2L3; NR1I2; PRDM14; MZF1; ASH1L; GBX2; GSC2; ONECUT2; SP4; E2F1; ATF7; HOXA3; AIRE; SOX30; SHOX; HR; ZNF440; LHX3; NFIX; BRCA2; HNF1B; ZNF778; CBL; PROP1; BARX2; SOX21; FOXD3; POU3F3; ARID3A; TP73; RUNX2; SUV39H2; FOXB1; HOXD12; ZNF484; KLF8; THAP9; EGR2; CEBPE; HNF1A; THRB; ZNF682; OVOL1; KLF15; FOXN1; ZNF507; CDX4; TFAP2B; ZSCAN2; WHSC1L1; ELF5; ZNF749; POU4F2; HNF4A; IRX4; ALX3; BRDT; LBX1; TBX5; SOX1; ZNF835; ZBTB43; MLLT1; NEUROD2; PITX3; MAPK8IP1; ZBTB7C; ASCL3; ZBTB3; RFX2; ZBTB6; PGR; CBX2; FOXL1; ZIM2; ELF3; VGLL4; STAT2; DOT1L; SOX14; ZNF287; NKX2-5; HOXC13; GLI1; CRX; SOX12; SOX15; ZNF696; RBPJL; ZNF358; ALX4; ZNF629; NR5A2; ZNF613; GBX1; HOXA6; RORB; NEUROG3; TLX2; ZFP36L2; NR2C2; ZNF197; ZNF226; ZNF219; TEF; TRIM29; TSC22D4; ESRRG; KLF6; HIVEP2; PRDM8; MYF6; ZHX2; MEN1; FEV; NR1H3; TBX21; TSHZ2; ATF6B; TFDP3; ZNF549; ZNF257; FOXJ1; EZH1; ZNF236; ZNF208; BIRC2; APBB1; ZBTB48; TBL1Y; HOXA1; RARG; RAX; POU1F1; TERF2; GATA1; EBF2; CARF; VGLL1; ZNF460; TAF7L; LMX1B; IRF6; TONSL; PPP1R13L; MYBBP1A; HOXB1; ZNF304; ZNF391; ZNF506; ZNF35; MYOD1; TBR1; BACH1; TDP2; SMAD2; FOXI1; WWP1; TFAP4; PRDM12; FEZF2; EVX1; ASCL2; ERCC2; NEUROD4; NR1I3; PPARA; SNAI2; KLF3; NFIC; KDM5C; ZXDB; TAF4B; MYF5; CBX8; POU4F1; HIF3A; NR3C2; CIR1; HOXD13; KLF13; TCF15; GCM1; ZFY; ZNF711; AFF2; SMAD3; EHMT1; TFAP2C; DNAJC1; PML; ZNF165; ZNF671; SOX18; HDAC7; UTF1; MYOG; THAP3; ZNF75D; TRIM22; DCC; NEUROG1; WDHD1; TCF4; REST; HIC2; ZNF141; BLZF1; ZBTB7B; ZNF286A; ZNF112; PHOX2A; RFX1; FOXP3; PAX3; ZNF135; ZKSCAN7; MAFK; ZKSCAN8; HBP1; CSDC2; AFF3; MAK; LHX5; ZXDC; PPARGC1A; ZBTB44; NPAT; ZNF282; DYRK1B; ZNF480; NKX2-8; MED14; SNAI1; RELB; SNAPC4; TCF7L1; ZNF816; HOXC11; TRAK1; ZNF180; NHLH1; SIX3; ZNF223; ETV6; NRBF2; GATA4; VAX2; PRDM1; HAND1; MTA2; CHD4; ETV2; ZNF334; EPAS1; ZBTB39; SKI; TRPS1; ING4; KLF1; SIX6; PRDM16; ESRRA; THRAP3; ZNF557; PRDM2; HIC1; SP1; RXRG; SIX5; ARHGAP35; NFX1; HIVEP3; HAND2; ZNF532; ZNF415; CDIP1; MED24; EN1; CAMTA2; ZNF768; ERF; KDM4A; NANOG; ZNF586; CDX2; IRF1; TBX3; ETV3; PHOX2B; ZNF516; RUNX1; FLI1; OVOL2; ZNF345; YEATS4; HMGXB3; FHL5; ETV7; MSC; SMAD9; RARB; BCLAF1; RXRA; KLF7; RORC; FOXO1; THRA; ATOH1; ASXL1; FOXE1; ZNF623; PRRX2; NRF1; NUP62; CIITA; OLIG2; KLF9; AGO2; HOXA7; SND1; PIAS3; ZNF329; CBX7; CREB3L2; MBD1; ARID5A; NPAS2; INSR; ZNF552; TRIM25; HIPK3; ZNF536; TFCP2; ZNF571; VDR; FOXL2; CIC; ZBTB25; ZNF665; ZNF510; ZNF211; ZNF606; GLI2; PAX9; HOXC8; PPARG; SREBF2; PBXIP1; LPIN2; SKIL; JAK2; ZNF273; KLF2; TFEC; ZNF443; E2F3; NKX2-2; MYB; E2F2; SMARCA1; ZSCAN18; NFAT5; BRPF1; OSR2; GATA2; MDM4; PROX1; CREBZF; NR3C1; CTNNB1; STAT5A; IL16; TBX2; DDX5; SOX10; RNF14; WNT4; TBL1XR1; SERTAD2; E2F5; MXD1; MLXIPL; PDLIM1; AFF4; BHLHE41; CDX1; E2F8; ELK4; NR1H4; ARNTL; ERBB4; CALR; EHF; ZNF124; TLE2; CEBPB; HDAC4; NKX3-1; TRIM16; ZNF528; MITF; ERG; PLAG1; ZNF264; POU2AF1; NFE2; GRHL2; NKX2-1; TFEB; CRYM; ID1; TAL1; SPIB; HOXD10; RARA; MEOX2; NCOR2; MYT1L; GATA3; RCOR1; LMCD1; TXNIP; ZBTB38; SOX17; NR0B1; ZSCAN31; CBFB; TGFB1I1; RERE; FOSB; NR1D2; MYBL1; IRF4; MECOM; BCL11B; ID3; JUP; NFATC3; SOX9; BASP1; LEF1; ESR1
Down-regulation 134 IKBKAP; ERCC3; PTTG1; HDAC1; RAN; RNF138; ITGB3BP; SUPT5H; NR2F2; IRF3; IRF9; ENY2; EHMT2; SMAD1; MYNN; NEDD8; PFDN5; APEX1; THAP11; KAT8; TULP3; CBX5; ZNF146; YBX1; TAF11; PHF1; SHOX2; TOX4; BAZ2B; MED21; ZZZ3; PMS1; ZNF84; PCGF2; DEK; RNF10; HMGB2; C1D; MKL2; RNF111; KLF11; THAP10; ZFP36L1; TLE1; DDIT3; COPS2; NRIP1; CNOT2; SPEN; ATF4; RLF; CARHSP1; UBE2I; MEOX1; SIX2; ZBTB11; ZNF91; ERBB2; TAF4; DEAF1; ZNF669; BTAF1; MEIS2; TSC22D1; AIP; ZNF248; LITAF; INSM1; CBX3; SUMO1; EDF1; CSDE1; ENO1; NACA; PAXBP1; TRIM28; CBFA2T2; CRK; NR2C1; YEATS2; CCNC; TRIP6; HMGXB4; ZNF652; ZBTB18; TADA3; IRF8; HNRNPD; BTF3; CHD1; HMGA1; RFX5; ZNF232; DNMT3B; PURA; CNBP; ZNF12; TAF10; FOXG1; NONO; SSBP2; PBX3; ATF2; HMGN3; ZKSCAN1; MSX1; HEY1; RORA; ETV5; IRF7; HMGB3; EYA1; CREBL2; CRY1; SOX11; RBL2; CENPF; MXI1; TCEB2; HHEX; KLF10; TOX; ID4; ISL1; SATB2; FLNA; MAFB; PAX6; MAF; HTATIP2; PSIP1; PBX1; TOX3; TOB1