Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID23643 Vorinostat GSE70138 NEU Human 24h 10uM EID0051
Types Number Response transcription factors
Up-regulation 70 EGR1; HMG20B; GATA2; SETD3; FOS; CDK7; RBBP8; GTF2A2; HOXA5; STAT1; CDK9; DRAP1; STAT2; MYCBP; IRF3; ACTL6A; RBPMS; IRF7; MED20; LMCD1; ZBTB48; CREG1; RBBP5; ETS1; ELK3; CCNC; TGFB1; ZNF205; BLZF1; POLR3C; ETV5; JUN; NR2F1; ARNTL; TRIM22; SPIB; ZBTB16; MYBL1; CITED2; MITF; LITAF; OSR2; KLF10; ING2; IRF9; LOXL2; NFE2L3; BRD2; NRBF2; ATF3; FOSB; TAF10; TOB1; ZNF165; CCNH; CALR; NR4A1; ZNF217; PTRF; WT1; ECD; HHEX; TGIF1; SNAI2; TFAP2C; SOX9; GATA6; NR2F6; ESR1; TRIB3
Down-regulation 166 SOX11; USP22; VGLL4; HDGF; SMARCA4; NRIP1; SCMH1; NFKBIA; ZMIZ1; BPTF; AGO2; MYT1L; ID4; SREBF2; PHF2; PATZ1; ZEB1; EYA1; ZNF529; BCL11B; HIVEP1; HCFC1; ZNF248; SALL2; NCOR2; TCF12; SATB1; LEF1; ZBED4; CHD3; RBFOX2; ZFHX3; MLLT10; ZHX2; AFF2; RXRA; GTF2IRD1; ERBB2; ZNF32; PHOX2B; PUF60; ZNF146; MTA1; NUP62; BACH2; MEF2A; HIRA; PLAG1; NHLH2; ARID4B; ZMYND11; PLAGL2; PKNOX1; BCL11A; TRRAP; NFYC; CBX5; ZMYND8; ALX1; E2F3; ZNF711; HDAC2; ZNF43; LHX2; FOXM1; E2F5; SALL1; DLX5; TLE1; PCGF2; SMARCE1; ZFP36L2; GLI2; TSC22D3; BASP1; PBRM1; RFX5; ZNF302; PCGF3; HMGB2; CTCF; TCF20; MAFB; ASCL1; SETD2; DDX17; MYCN; BAZ1A; KDM5B; ZFHX4; ZEB2; TRAK1; BRD3; APEX1; TLE4; CCNA2; TCERG1; GABPB1; ZFP64; CNOT6; BAZ2B; CAMTA1; NCOA6; TGIF2; INSM1; KAT2B; TCF4; ZNF532; ZNF536; PIR; UBP1; TOX3; ZNF84; BCOR; DEAF1; CTBP1; EP400; MED24; ST18; HMGB3; CHD7; MAGED1; ZIC1; ZNF189; ISL1; PROX1; RLF; MYB; ATF7IP; MEIS1; NCOA2; HIC2; FOXJ3; ZSCAN18; MNT; CUX2; TRIM29; ZNF423; SIAH2; MYCL; PBX3; ADNP; TSC22D1; HIVEP2; ZNF292; NAB1; TBL1X; ZMYM2; ZBTB38; MED1; PAX6; ID3; KLF9; SAP30; JARID2; CBX3; STAT6; MNDA; IFI16; ABL1; ID1; PDLIM1; POU2AF1; BMI1; NR1H2; KAT6B