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Overview Perturbagen Expression Profiles Transcriptional Responses
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Overview Perturbagen Expression Profiles Transcriptional Responses
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Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID23332 Vorinostat GSE70138 NEU Human 24h 10uM EID0049
Types Number Response transcription factors
Up-regulation 112 CREG1; HMG20B; NRBF2; EGR1; DRAP1; GTF2A2; FOS; SIX1; STAT1; RELB; NR3C1; TSG101; SPIB; HBP1; MXI1; MYCBP; TCEA1; TSC22D4; L3MBTL1; CRK; CEBPD; RUVBL2; NOC2L; ING2; HDAC3; SND1; ERCC2; CTR9; COPS5; DBP; ARNTL; HOXA5; DDIT3; CRY1; SIRT7; IRF3; MED4; YBX2; BLM; TDP2; TAF11; EGR2; SUZ12; TBP; RBBP5; ZSCAN32; TAF12; FOSB; BRD4; FOXO4; BIRC2; BCL10; TAF10; TERF1; DLX4; RARA; AHR; SUPT4H1; LPIN2; CDIP1; ZNF131; ZNF692; PPARGC1A; RNF10; RNF6; ETV5; UBE2B; POU4F1; HOXC10; IRX5; CHD1; MAF; IRF4; NR3C2; PAX5; CCNE1; EGR3; IKBKAP; ELF5; ZNF281; CREB3L2; VDR; BRD8; MYBL1; IRF7; KLF6; POU2AF1; BCL3; DLX2; SMARCA1; SSBP2; TOB1; HLTF; KLF10; PHF20; HMGN3; NEDD8; TSC22D1; TRPS1; SOX9; NFIB; RUNX3; ZBTB16; YWHAB; TCFL5; NR4A1; LITAF; ACTL6A; PSIP1; ID1; TRIP6; BASP1
Down-regulation 190 NFKBIA; GLI2; MTA1; WDR77; BCL11A; UBTF; TGIF2; ZEB1; ZBED4; JAK2; ARL2BP; ZIC3; RREB1; PKNOX2; HDGF; KLF3; ZHX2; LHX2; SREBF2; ZMYND11; CUX2; SP1; ARID1A; ZSCAN31; NSD1; SMARCB1; HOXA11; CSDE1; ST18; RBFOX2; ZNF85; LIMD1; AGO2; ELK4; TAF5L; MLLT10; GRHL2; WWTR1; SOX17; SSBP3; AR; ZBED1; ZNF253; MYC; RFX7; TAF1; NCOA1; MYB; NCOA6; PIR; BRIP1; TCF12; FOXL2; THRA; PHF2; ZNF202; RNF111; RARB; UBP1; BNC2; MYCL; NPAS2; ALX1; FOXF1; AES; UBE2L3; VEZF1; NCOR1; ZFHX3; GTF2I; NEUROD1; ZFPM2; FOSL2; HIPK1; TRIM33; ZNF124; ETS2; TGIF1; TRIM29; ID4; BCOR; HIRA; CNOT6; ZNF136; FOXE1; ERBB2; DACH1; MAFF; ZFP36L2; RBL2; PCGF3; ETV4; SOX13; CCDC59; TBX1; CCNA2; BAZ2B; ZNF423; ZFP36L1; KAT6B; SCMH1; ZBTB38; ZNF134; HHEX; LIN28A; MGA; SMAD5; BCLAF1; ATF7IP; PEG3; BPTF; APEX1; TFAP2C; RNF138; FOXM1; MDM2; NHLH2; BAZ1A; TAF9B; DEK; ATN1; HIC2; RFX5; PBX3; HIPK3; PRRX1; HMGB3; MAFB; PUF60; ZNF532; HDAC9; CTBP1; ZNF443; ZBTB20; MKL2; MYCN; ZNF43; EMX2; IFI16; ZBTB1; PATZ1; CHD3; HOXB6; CTNNB1; EN1; ZNF292; EHF; ZNF264; MEIS2; SMARCA4; KAT7; HEY1; STAT6; EYA2; TCERG1; NR4A2; ESR1; TCF21; TRAK1; ELF4; HOXB2; SMARCC1; NFATC4; PIAS2; TAL1; SAP30; PSMC3; IRF6; ISL1; MYRF; ATF4; ZMIZ1; NFE2; GATA6; ERG; CARHSP1; JUP; MEIS1; ADNP; MAGED1; ZNF91; AEBP1; KDM5D; ZMYM2; PCGF2; MECOM; ZIC1; ASCL1; GATA3; TOX3
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