Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID22540 Vorinostat GSE70138 HUES3 Human 24h 10uM EID0041
Types Number Response transcription factors
Up-regulation 267 ADRB2; STAT1; NR1H2; CEBPA; ZNF224; CBX7; PPARD; EGR1; MAK; CALCOCO1; MYBL1; PPARA; CBFA2T3; ERBB4; PAX8; SOX4; NFKB2; POU2AF1; TRIB3; RB1; PPP1R13L; CRYM; EPAS1; CEBPD; ZNF362; ZNF331; SUPT7L; ID2; NR5A1; ZNF576; SIRT7; OSR2; TGFB1; CBX4; PAWR; ZNF235; PSMD9; TSHZ2; TCEA2; IRF7; TBR1; MBD2; MAML3; DOT1L; JUN; ONECUT1; ZNF696; RORC; FEZF2; BCL3; ZNF701; NEUROG1; ZNF394; SUPT5H; SOX18; ZNF557; ZFHX4; PRDM10; JUP; EMX1; SUPT4H1; NR0B2; NOC2L; ASCL3; ZNF440; ZNF695; E4F1; CREB3; ETV2; TAF1C; ZNF407; SHOX2; POU2F3; FOSL2; KAT2A; HNF1A; CHD2; RING1; HIF3A; TFAP2A; POU4F3; SIM1; E2F4; SIN3B; MYF5; EMX2; LYL1; TBX6; ZNF75D; ZKSCAN4; IRF9; ZNF780B; ZNF500; MYC; ZNF688; RARG; BARX1; TP73; ZBTB44; NEUROD1; SP100; NR4A2; HBP1; SOX9; ZNF81; ZNF180; ZNF80; PAX4; TFDP3; MECOM; TBX1; JAK2; NR1I3; NR4A3; SUPT6H; RXRB; BRDT; TLX3; PTRF; IRF1; IRF6; ZBTB17; ZNF768; ZNF239; LZTR1; ZNF214; CAMTA2; EN1; HMGXB3; GFI1B; SNAI2; ZNF225; FOXF2; ACTL6B; DAXX; HHEX; ARID5A; ZNF611; PRDM12; THRA; ZEB1; MNDA; HSF4; E2F8; DLX2; AFF4; ANKRD1; ZNF444; REL; KLF2; ZFPM2; NR2E1; WNT4; MYT1; HOXB1; STAT4; ARNT2; PAX5; ZBTB7A; NFIC; MEIS2; ZNF155; ELF4; NFE2L2; PCGF1; MEF2D; ZHX3; RUNX3; TAF4B; VDR; DNMT1; NR2F1; ZNF136; CD3D; CEBPE; ZNF350; SPDEF; HSF1; PITX1; PHF1; CREM; ZNF232; SIRT2; GATAD2A; ARID5B; IRF8; PRDM2; BAZ2A; CDIP1; CNOT3; ARID1A; MED15; MEOX2; NR4A1; HLX; FOXA1; ESR1; SERTAD2; NAB2; NKRF; ZNF165; ZNF44; TFEC; NR3C2; THAP7; AES; FOS; BRD4; FOXG1; SAFB2; CREB3L2; DACH1; ST18; TULP3; CALR; SP110; HOXD1; ZHX2; ISL1; BANP; DLX5; ZNF91; ATF3; CERS6; TOB1; TWIST1; ETV5; ZNF160; ZBTB20; PBXIP1; SOX17; BNC2; SP140L; SIX2; WWC1; MXI1; CAMTA1; ESRRG; TCF21; CREG1; BTG1; TCF7; CDK2; ELF3; CREB3L1; RUNX1; HDAC9; KLF5; HOXC10; SIX3; GATA6; MYRF; JUND; AHR; ZNF423; ZNF512B; BRD2; EHF; PEG3; TBX3; BHLHE41; FOSB; GATA2; INSM1; TRIM29; ZIC1; MEF2C
Down-regulation 225 HMGA2; ATF1; CCNA2; HDAC2; NUP62; PSIP1; ZMYM2; SMARCC1; ETV1; TP53; TCERG1; XBP1; YBX1; SUV39H1; RBBP4; PMF1; GABPB1; LIN28A; VGLL4; RFX5; ECD; SMARCA5; ZFP64; SMARCE1; ZNF532; ADNP; NFKBIA; BRD3; ELK1; ZNF274; MYCN; SALL2; HMGB3; JARID2; POU5F1B; ZIC3; RAN; RFX7; SUZ12; USP22; NACA; VEZF1; REST; CTCF; RNF4; ARID4B; BCLAF1; NANOG; KAT7; DDX17; CEBPZ; PCBD1; SETD2; DNMT3B; DEK; SMARCA4; PARP1; PCGF2; HLTF; RHOA; TBL1XR1; TCFL5; PATZ1; ZMYND11; EP400; ZNF84; SFPQ; RBPJ; SATB1; ENO1; FOXJ3; TOX3; MLLT10; KDM5B; CNOT1; NPAT; MED1; ATF4; NONO; VPS72; SALL1; ZNF813; BLM; CBX5; RBM14; BTF3; FHL2; WHSC1; PMS1; DPF2; STAT5B; HSF2; NFE2L1; PIAS2; CHD7; ING2; DEAF1; ZNF24; ZBTB14; KDM4A; ZMYND8; MAGED1; ZBTB1; STAT3; PBRM1; TRIM32; FOXO3; USP21; NPM1; WDHD1; HNRNPD; PHF20; AFF1; RNF138; ZNF217; CNBP; ZNF189; NCOA6; ZNF292; PDLIM1; BATF3; HMG20A; FOXO1; RNF10; HSBP1; MTA1; HMGB1; KLF10; ZNF672; CDK8; TBL1X; HTATIP2; HMGB2; NR1D2; PURA; SNW1; NFYB; ITGB3BP; ZNF146; CCDC59; ZNF134; TULP4; BASP1; BMI1; MED4; SMAD2; PLAGL2; TRAK1; ERBB2; YBX3; CENPF; NRBF2; TGIF1; SP3; DMTF1; DDX5; ZEB2; EGR3; BATF; TLE4; GTF2I; PLAG1; TCF12; EDF1; ZNF516; YWHAB; ZNF329; CREBZF; PIR; KAT5; ZNF22; ASH2L; RLF; CBX3; GTF2IRD1; ZBED1; APEX1; FUBP1; PBX1; KDM2A; NEDD8; SPEN; CARHSP1; RBPMS; ID4; E2F3; TERF1; ARID4A; E2F5; PIAS3; TFDP2; CSDE1; TGIF2; TAF9B; BACH1; CHD1; ATF7IP; RERE; PTTG1; ING3; ZNF281; IRX5; SIAH2; SOX2; UBE2I; RBBP7; IFI16; NCOR2; ZBTB38; SMARCA1; TRIM28; BCOR; SAP30; NR2F2; HOXC6; WWTR1; KDM5D; TXNIP; FOXC1; ELK3; EGR2; MAF; MYBL2; SOX11; ASCL1