Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID19958 Vorinostat GSE70138 NPC.TAK Human 24h 10uM EID0131
Types Number Response transcription factors
Up-regulation 98 HMG20B; FOXO4; EGR1; STAT1; DRAP1; FOSB; IRF3; CCNH; JUN; PPARD; CREG1; CRK; MYCBP; ZNF324; NR4A1; GTF2F1; RUVBL2; SMAD3; TGFB1; CEBPB; CALCOCO1; SND1; ATF3; UBE2B; CTR9; SIX1; WWC1; SMARCA2; LHX6; HMGA1; NOC2L; MNAT1; VDR; MXI1; TSG101; SP100; DLX4; SATB2; NRBF2; HDAC1; ZNF131; NR4A2; EPAS1; ASH2L; KLF5; ZBTB7A; MBD2; JUNB; ARNTL; OSR2; IRF7; RUNX3; TOB1; JUND; MEF2C; ZNF593; CREB3L1; NR3C2; SERTAD2; DBP; PHF1; ZNF589; TAF10; KLF6; ZNF331; PITX1; CRYM; HDAC5; CITED2; CBX6; PPP1R13L; FOS; EGR3; SP110; SPIB; CBFA2T3; BRD4; SMARCD3; BRD2; MYBL1; INSR; PURA; FOXJ3; MLXIP; KLF4; DDIT3; HTATIP2; KLF2; KLF10; SNAI2; AHR; TP63; PAX5; TWIST1; IRF8; TRIP6; MAF; PSIP1
Down-regulation 213 HMGA2; NRIP1; PCBD1; TP53; ETV1; EZH2; SMARCA4; SALL1; MYCN; BAZ1A; ATF1; GLI2; PHF2; CCNA2; TCERG1; IKBKAP; HDAC2; SOX11; HDGF; ZNF84; NFKBIA; ZBTB1; SOX2; STAT5B; ZNF274; HOXB2; AEBP1; ASXL1; CTCF; PMF1; TCF12; PUF60; BRIP1; ERBB2; TSC22D3; ZNF426; ARL2BP; TGIF1; ARID4B; ZBED1; GABPB1; SCMH1; LIN28A; ZNF32; MLLT10; ZNF532; PLAGL1; ATF7IP; ZNF529; ZKSCAN7; MAGED1; DEK; TRIM24; ADNP; ZNF423; HMGB1; LEF1; TAF9B; ZBTB6; CREB1; WHSC1; BCOR; ISL1; HIVEP1; SALL2; ZNF22; ZBTB24; PLAGL2; NCOA2; PAXBP1; ZNF43; ZNF140; TRRAP; BAZ2B; HMGB2; TBL1X; ZFP64; REST; ZNF189; ZMYND11; BCLAF1; ZIC3; HNRNPD; HMGB3; NCOR1; ZBTB14; TGFB1I1; ZNF146; NFKB1; ZNF134; FOXM1; RFX7; MED17; SMARCC1; TOX3; SOX3; RNF138; LZTS1; NFYB; HOXA2; ZFY; MEIS1; CHD9; HIC2; ZNF177; E2F3; ID4; ZBTB39; SP3; UIMC1; ZNF292; ID3; PATZ1; IFI16; ZNF107; CARHSP1; ZNF141; ZNF236; PMS1; MYB; ZFP36L2; PHIP; RXRA; AR; SMARCA5; AFF1; VGLL4; DDX17; BRD7; WDHD1; DDX5; BRD3; ZBED4; STAT6; HOXA7; FOXO1; TCF4; HIRA; ASCL1; ZNF232; XBP1; HOXB6; NUP62; TFEC; RBBP8; HIPK3; HOXC4; ZSCAN18; SMAD6; SMARCE1; ZEB1; ZNF516; PBX3; ZNF329; TLE4; SOX17; CENPF; OLIG2; ABL1; CHD7; ZNF443; SCAND1; BPTF; NAB1; HLX; ZNF273; ZNF264; ZNF83; NCOA1; PITX2; ZHX2; PCGF2; SATB1; APEX1; PHOX2B; BACH2; MYCL; INSM1; CTBP1; TAL1; ZNF467; ZSCAN31; MEIS2; TCF7L2; FOXE1; EYA1; ZNF266; ZNF544; KAT2B; SOHLH2; ZNF652; HOXA5; ESR1; BACH1; SIAH2; PAX6; NKX2-1; SMAD1; CUX2; ZMYM2; BCL11A; TLE1; BMI1; LITAF; RBPMS; ZFPM2; MNDA; MTA1; PEG3; HOXC6; SUV39H1; GATA3; E2F2