Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID19427 Entinostat GSE70138 NPC.TAK Human 24h 10uM EID0096
Types Number Response transcription factors
Up-regulation 89 FOXO4; NCOA3; SOX4; CREG1; CEBPA; POU4F1; VDR; CCNH; CEBPZ; MAFF; DLX4; TAF1; TAF7; CREBL2; CERS6; NFIL3; CCNC; ZNF224; LOXL2; SOX10; IRF7; REL; CREM; SP100; NR3C2; MDM2; NR4A1; GATA6; RYBP; KLF2; WWTR1; BTG1; SP140; TRIM16; PAWR; PRDM2; GLI2; ZNF606; BRD2; ELF3; SP110; FOXO1; SERTAD2; TRIM22; ALX1; ANKRD1; ADRB2; HOXD1; KLF4; OSR2; LMCD1; RBFOX2; ZNF160; KLF5; NR0B1; NFE2L3; RUNX3; KLF10; PITX2; MYRF; HEY1; ARNTL2; EPAS1; ATF4; ZNF331; TP63; IRF1; ZNF586; ELF5; RUNX1; SNAI2; AHR; TOB1; NR4A2; TWIST1; BCL3; HES1; JUP; HOXB7; BASP1; IFI16; ERG; EMX2; ID1; FOXJ3; HOXC6; EHF; MAFB; PSIP1
Down-regulation 125 MTA1; MYBL2; BRCA1; HMGA2; SALL1; MAGED1; NUP62; TCERG1; CCNA2; PAX8; SMARCA4; TRRAP; CHAF1B; FOXM1; WHSC1; PBX3; HDGF; ZNF232; PATZ1; ZNF282; RBM14; WDR77; DNMT1; PSMC3IP; CIZ1; KMT2B; EWSR1; RING1; SLC2A4RG; ZBED1; BRD3; NEDD8; RXRA; ZBTB18; TP53; SSRP1; HIRA; NELFB; E2F3; ZKSCAN5; TCF25; ING3; BRIP1; UBE2L3; PHF2; SALL2; MED15; HMGXB4; CHD8; LZTR1; VPS72; PLAGL2; UBP1; ZNF443; SCMH1; TTF1; ATF5; HIC2; ZNF273; DPF2; NCOR2; ZNF43; ZNF516; BRD7; POLR2A; TADA3; ZNF672; NCOA6; TBL1XR1; ZBED2; TRAK1; PQBP1; THAP7; HMGB3; RBBP8; ARL2BP; MLLT10; JUND; SKI; GATAD2A; MEIS1; ZNF468; SSX1; PBX2; TRIM24; BAZ2B; FLNA; TBL1X; CBX5; HNRNPD; ZNF93; SP3; ZNF107; NR2F2; JARID2; MEF2A; PA2G4; YAP1; DRAP1; TRIP6; CARHSP1; NEUROD1; TCF4; MYCL; NKX3-1; ERBB2; ARID1A; SUV39H1; LEF1; CENPB; MYCN; FOSL2; ZFPM2; ISL1; ASCL1; MEIS2; PUF60; ZFP36L2; PEG3; ZIC1; HOXC10; HOXB6; TBX3; NFATC3; NR3C1