Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID18952 Vorinostat GSE70138 NPC.TAK Human 24h 10uM EID0060
Types Number Response transcription factors
Up-regulation 99 EGR1; HMG20B; FOXO4; DRAP1; PPARD; IRF3; JUN; CREG1; STAT1; IRF7; JUNB; ZNF593; MYCBP; NR4A1; CRK; NOC2L; EPAS1; SIRT7; MXI1; RING1; ATF3; USP16; BBX; FOSB; SPIB; TCF15; RXRB; ACTL6A; COPS5; MEF2C; ZNF224; CDK9; ID2; ZNF331; SND1; TGFB1; ARNTL; HMGA1; GTF2F1; PHF1; CREM; ZNF394; RUVBL2; TERF1; SETD3; TOB1; SIX1; RBBP5; CALCOCO1; SOX10; CALR; NR4A2; OVOL2; MBD2; CTR9; TCF7; BCL10; CBX7; MYBL1; CEBPB; CCNH; JUND; CITED2; SP110; DLX4; ADRB2; CXXC1; MED15; PPP1R13L; CNOT3; RUNX1; NR0B2; HDAC1; KLF5; NR5A2; DDIT3; STAT2; AHR; KLF2; TAF10; TWIST1; TRIB3; NR4A3; EDF1; KLF6; NR3C2; RUNX3; PITX1; TRPS1; FOS; NR1H4; IRX5; TCEA1; IRF1; ZNF91; POU4F1; LOXL2; ARNT2; TFAP2A
Down-regulation 205 HMGA2; PCBD1; TP53; TCERG1; PATZ1; SMARCA4; PHF2; MYCN; ZBTB1; GABPB1; TSC22D3; CCNA2; EZH2; SOX2; ETV1; ATF1; TRRAP; NCOR1; RAN; HDGF; HDAC2; FOXM1; BRD3; ARID1A; PLAGL2; APEX1; CHD9; YAF2; PMF1; ADNP; NCOA6; SALL1; ZMYND11; CBX5; ZNF282; TGFB1I1; SIAH2; TAF9B; BCL11A; BAZ1A; SMARCC1; YAP1; ZNF140; GLI2; EYA1; AEBP1; HOXA10; ZNF84; STAT5B; BRIP1; ZNF532; WDHD1; TLE4; RXRA; ZBTB38; ZKSCAN7; CDK8; SMARCA5; BCLAF1; ERBB2; NUP62; MED24; HES1; HMGB3; NFKBIA; SOX11; HOXA7; ZEB1; MAML1; CUX1; REPIN1; TBL1X; ZBED1; YBX3; AR; LEF1; ZNF22; ZFPM2; VGLL4; TCF12; HMGB1; SMARCE1; ZNF43; ZNF93; CTCF; ZIC3; CARM1; ZBED4; ZNF248; WHSC1; USP22; ZNF529; FHL2; ARL2BP; ILF2; HIRA; RFX7; IFI16; AGO2; BPTF; RNF10; KLF7; ZNF629; ZNF423; ZMYM2; HDAC4; PBX3; TGIF1; SCAND1; CHD4; MEIS2; FOXO1; MTA1; GATAD2A; TCF4; BAZ1B; SCMH1; MLLT10; RBM39; ZNF3; ID4; MEIS1; CHD7; ZNF146; TBL1XR1; CNOT6; CREBZF; HMGB2; NCOR2; CUX2; EP400; TAF1D; C1QBP; HIC2; PGR; MYB; TCF7L2; ABL1; ZMYND8; CHD8; NFYB; PHIP; TGIF2; MAGED1; NRIP1; NCOA1; ZNF711; GTF2IRD1; CREB1; SOX17; SMAD3; KLF9; HOXA11; SALL2; ZNF107; CENPF; BMI1; HOXB2; ING3; RREB1; RBBP8; GFI1; BACH2; ZNF467; ZNF131; ZFP36L2; ZBTB16; ZNF516; PBX1; DACH1; ZSCAN18; LIN28A; CTBP1; SATB1; CTBP2; RERE; XBP1; DEAF1; BAZ2B; DDX17; HOXC6; HOXB6; ZNF770; CREB3L2; DLX2; WT1; TLE1; NCOA2; FOXL2; PLAGL1; ZHX2; MYRF; GATA4; NR2F2; MNDA; ASCL1; EMX2; TOX3; SMAD1; FOXF1; SUV39H1; BASP1; GATA6; PEG3; NFATC3