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Overview Perturbagen Expression Profiles Transcriptional Responses
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Overview Perturbagen Expression Profiles Transcriptional Responses
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Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID18645 Vorinostat GSE70138 NPC.TAK Human 24h 10uM EID0058
Types Number Response transcription factors
Up-regulation 109 HMG20B; CEBPD; CEBPZ; DRAP1; STAT1; CREG1; CCNH; TFAP2C; FOXO4; JUNB; TRIB3; MYCBP; SERTAD2; PPARD; JUN; CRYM; ZNF331; IRF6; DLX4; NFATC4; TDP2; ZNF394; ACTL6A; CBX7; TFAP2A; IRF7; CALCOCO1; HOXD1; WWC1; POLR3C; MYBL1; NOC2L; NKRF; SP110; THRB; SETD3; ARNT2; NR0B2; ZNF500; NR5A2; DAXX; HBP1; IRF9; CREM; FOSB; CEBPB; NR4A1; TGFB1; SND1; ZSCAN32; PPP1R13L; TP63; TOB1; CREB3; VDR; NR1H4; CERS4; TCEA1; ETS1; THAP7; KLF11; SRCAP; TCF7; FOS; ATF3; ARNTL; NR4A3; IRF3; TCEB2; TAF4B; EGR1; MBD2; TSG101; BCL3; UBE2B; SPIB; ELF3; CBX4; CREBL2; MXI1; HHEX; LYL1; TRPS1; PAWR; MAF; LITAF; NR4A2; OSR2; NFE2L3; MNAT1; DDIT3; CITED2; EPAS1; TWIST1; KLF10; SIX1; NR3C2; ZNF544; ZNF589; KLF4; CALR; SNAI2; SATB2; KLF5; EGR3; JUP; PAX5; ADRB2; WT1
Down-regulation 181 HMGA2; ETV1; SMARCA4; EZH2; MTA1; PCBD1; TCERG1; NUP62; HDAC2; RBM14; TP53; NRIP1; CCNA2; NFKBIA; PHF2; SCMH1; GABPB1; TSC22D3; ERBB2; PBRM1; USP22; SMARCE1; ADNP; MAGED1; SMARCC1; SUV39H1; ING3; HNRNPD; BCLAF1; RBBP4; ARID4B; WHSC1; ZFP64; HMGB1; ZMYND11; ZBED1; APEX1; TCF12; ATF1; PATZ1; ZBTB38; SMARCD1; HMGB3; CHD9; STAT5B; SOX11; BRD3; NCOR1; PMF1; MYCN; ZNF282; CENPF; VGLL4; TGFB1I1; ZBTB1; BAZ2B; SALL1; EP400; CBX5; TBL1X; KAT7; SSRP1; TRRAP; PLAGL2; SETD2; RFX7; TLE4; ZNF532; HSF2; CHD3; FOXM1; ZNF292; UBP1; SIAH2; NCOA6; HDGF; PLAGL1; DPF2; MEIS1; TRAK1; TAF9B; MED17; CTBP1; ZKSCAN7; CTCF; ARL2BP; TAF1D; ID4; MGA; ZEB2; BAZ1A; HOXA11; LZTS1; TCF4; ZNF134; SREBF2; POLR2A; SFMBT1; DDX5; BATF; MLLT10; ZNF146; ZEB1; NR2F2; EWSR1; ABL1; KDM5B; MED24; SFPQ; BMI1; GTF2IRD1; MYB; ASCL1; BATF3; ZNF148; PKNOX1; MED1; ZNF516; ZIC1; ASXL1; MSX1; GLI2; WDR77; SKI; SMARCA5; LEF1; REPIN1; CTNNB1; SMAD4; PCGF2; CHD7; SOX17; HMGB2; ATF4; CARHSP1; ZNF84; PAX6; FUBP1; CHD4; E2F5; RBM39; VEZF1; ZNF22; XBP1; DDX17; C1QBP; AEBP1; SMAD1; TGIF2; IFI16; AFF1; HOXC6; PBX3; NCOR2; DACH1; RBPJ; HMGN3; PIR; ZSCAN18; KAT6B; EYA2; TGIF1; INSM1; NR1D2; TOX3; ARID1A; RBPMS; ZNF423; PBX1; FOXD1; FOXF1; ID3; EYA1; TRIM22; RERE; KDM5D; YBX3; HES1; TLE1; BASP1; E2F2
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