Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID17523 Withaferin-a GSE70138 MCF10A Human 24h 3.33uM EID0020
Types Number Response transcription factors
Up-regulation 491 ATF3; DDIT3; ARID4B; CALCOCO1; ZKSCAN4; HBP1; TSC22D3; ZNF345; ZNF117; TOX4; ZNF254; ING4; TFE3; TRPS1; FOXO4; TBP; HIVEP1; HDAC5; ZKSCAN3; MXI1; NR1H2; TRIP11; ZNF682; ZSCAN32; ERBB4; DLX5; CIR1; NR5A1; GABPB1; EZH1; PEX14; RELB; HINFP; ZNF232; ZNF12; ZNF394; EGR1; ZSCAN16; ZNF253; BANP; GCM1; PBXIP1; ELF5; ZBTB3; CUX1; ZBTB48; ZNF132; SPI1; ZNF506; ZNF222; MYCL; CSDC2; ZNF778; PHF1; CREBL2; ZNF44; ASCL3; FEZF2; ZNF426; ZKSCAN8; PHIP; SIN3B; VGLL4; SP4; THRB; ZNF665; ZNF10; TBX6; ZNF212; TSG101; ALX3; ZNF225; ZNF235; ZBTB44; ZNF675; CHD2; ARID4A; ZHX2; SKIL; ZNF195; MNDA; ZNF557; SALL2; MYNN; LYL1; ZNF154; PNRC1; ZNF79; ZNF81; ZSCAN9; ZSCAN31; ZNF274; THAP3; NHLH1; NR4A1; ZNF91; ZNF331; TRAF6; ZNF500; RFX3; CBX4; ZNF14; SP2; SSX7; ZNF652; ZNF549; ZNF688; ZBTB43; NFYC; ZNF573; IKZF3; SHOX2; NEUROG3; TAF11; ZNF442; ZNF140; ZNF257; KDM2A; TBX5; MDM4; ZNF136; NR6A1; ARID5A; TAF1C; BRDT; ARNT; SUPT4H1; TFDP2; BARX1; RXRB; RING1; ZNF674; AFF2; ZNF75D; DYRK1B; ZNF391; SHOX; ZNF467; LHX3; CIITA; ATF7IP; ZNF419; CARF; UBE2B; ZNF304; ZNF780B; ETV2; HMBOX1; CBFA2T3; ZNF354A; ZNF273; ZNF141; ZNF175; ZNF611; PAWR; POU1F1; KLF3; ZNF214; IRF9; ZNF430; ZNF669; TULP2; CERS4; LDB1; GON4L; ZFHX3; NCOA2; ZNF473; SCRT1; RNF111; PKNOX2; NKX3-2; ZNF266; ZNF8; CAMTA2; ZNF695; KDM4A; ZNF93; DMRT1; ARID3B; APBB1; GBX1; ZNF34; HOXB13; ZNF492; ZNF35; TBR1; HCFC2; ZIM2; BTAF1; GTF2A1; ZNF668; E4F1; ZNF223; ZBTB40; TP73; VENTX; ZNF362; NR2C2; ETV3; ZNF24; RAX; SOX3; ZMYM2; ZNF407; SRY; ATF4; RYBP; SAP130; FOSL2; SOX18; STAT2; TEF; ZNF711; ZKSCAN5; POU2F3; TLX3; NFAT5; ZNF764; ZNF43; CREB5; ZNF80; ZFHX2; BAZ2B; WT1; HSF4; MZF1; ZKSCAN1; CRX; HOXB2; RSF1; ZFP69B; NFE2L2; ZBTB39; PLAG1; E2F3; ZNF701; PRDM14; GMEB2; ZNF550; TP63; NPAS1; NFATC4; MLLT1; ZNF268; POU6F2; CHD8; TEAD3; THAP9; ZNF85; EMX1; SIRT7; BRWD1; NFE2; RFX5; PRDM2; CBX7; ZNF529; ZNF770; SIX5; TCF7; ARHGAP35; JAK2; ZBTB17; BCL6; ZNF423; CAMTA1; SOX5; RORC; ZNF248; MEIS2; TBX19; EN1; ALX4; SUPT7L; NCOA3; RLF; PROP1; CBX2; ZNF224; SCAI; FOXO3; ZNF292; HIF3A; TAF7; SIX2; ZNF350; SOX21; ETV6; PAX8; ZNF155; MED13; NEUROG2; ZNF264; NKX2-5; WWP1; POLR3C; BCL11A; ZNF334; PIAS4; SSX1; MED23; GFI1B; GBX2; ZNF444; PIR; ZNF408; TMF1; ZNF23; KAT8; TFAP2C; CDIP1; KLF13; FOXH1; BRF2; SIX1; ZNF384; KAT2B; TULP1; AFF4; ZNF536; HESX1; TRIP4; HLX; NEUROD1; MXD1; ZFPM2; HOXB1; IRF7; ZNF468; SPIB; HOXD1; ZNF667; ZNF3; ZBTB25; ZNF544; ZNF358; ZNF671; BHLHE41; ZNF33B; TULP3; ZNF184; L3MBTL1; HIPK1; DPF2; PRDM10; MNT; NHLH2; PBX2; ZNF84; TBX3; INSM1; CEBPG; MEOX1; SIM1; OSR2; JUND; NKX3-1; ZFX; ZNF7; NFATC1; ZNF160; ZNF107; KDM5A; RBBP5; ZXDC; TRIM29; BPTF; HTATIP2; ELF4; ZNF606; ZNF267; ZNF219; PEG3; BLZF1; BRD8; MAFG; HOXD11; ZKSCAN7; GATA1; NAB2; BTG1; RBPJ; TOX3; HIRA; AR; NFIX; TRIM24; TULP4; ZNF165; TDP2; BACH1; NFE2L1; TRIB3; ZNF516; TBX21; HEY1; ID4; NR4A3; AIP; ZNF83; ZNF189; PIAS1; ZNF623; TWIST1; KMT2A; DLX2; XBP1; CBX6; TFEB; HIC2; LPIN2; SOHLH2; FOSB; SP140; CREM; SOX10; FOXF1; TCF7L2; INSR; ST18; TRIM33; ZNF721; MAFB; FOXG1; JUNB; SALL1; SUMO1; MEOX2; PIAS2; NR4A2; HOXB5; ZIC1; KDM5C; ASCL1; ZNF124; PRRX1; ZSCAN18; NKX2-1; TFEC; SP140L; BACH2; TCEA2; FOS; BRD4; FOXC1; TCF4; CREB3L1; ZNF415; RUNX1; SOX17; BNC2; ISL1; EMX2; MAFF; SOX2; GRHL2; EYA1; ATN1; RORA; KLF11; ARNT2; WNT4; SSBP3; DACH1; IRF6; FOXA1; AEBP1; FLI1; PAX6; FOXF2; BBX; TXNIP; CITED1; CREB1; NR1D2; KDM5B; POU2AF1; NRBF2; MECOM; IRF8; LEF1; MYRF; ZEB1; MAGED1; ARID5B; VPS72; MAF; SPDEF; NFATC3; GLI2
Down-regulation 128 CCNA2; MYC; TFDP1; HMGA2; RUVBL1; C1QBP; SUV39H1; MYCBP; RHOA; BRCA1; TCERG1; HDAC2; IKBKAP; SMARCC1; ADRB2; NFKBIA; NRIP1; PARP1; NR2F6; ATF1; RBM14; PA2G4; HOXA10; CENPF; DDX54; HNRNPD; EDF1; CBX3; RBBP4; NPM1; USP22; SMARCA4; BCLAF1; ITGB3BP; SUB1; CHAF1B; SSRP1; FOXM1; CREG1; RUVBL2; TCFL5; TRIM28; PTTG1; HMGB3; STAT3; TRIM32; CBFB; HMGB2; ETS2; YWHAB; UBP1; NUP62; NELFB; YBX1; HMGB1; PRKDC; ING2; WDHD1; PMS1; SF1; BMI1; CBX5; ELK3; WHSC1; GTF3A; PMF1; NONO; XRCC6; PPRC1; NEDD8; CARM1; RNF4; RNF138; SOX4; CAPN15; RBBP7; BRD3; RAN; WDR77; SMAD3; BIRC2; DR1; ZBED4; SFPQ; RBPMS; ZMYND11; EED; ENO1; SMARCE1; RB1; NAB1; GTF2I; UBE2I; CEBPZ; APEX1; HDAC1; SND1; MTA1; SLC2A4RG; ZFP36L2; MYBL2; HLTF; WWTR1; ZNF22; ZBTB38; CARHSP1; SMAD2; KLF6; NFIB; BHLHE40; ELF1; HOXC6; ID1; DNMT3B; ID3; TAF9B; MKL2; NR2F1; ELF3; PUF60; HMGA1; TRIP6; MYB; SMAD1; IFI16; TGFB1; SAP30; KDM5D