Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID14185 Vorinostat GSE70138 HME1 Human 24h 10uM EID0117
Types Number Response transcription factors
Up-regulation 220 FOXO4; ATF3; NFIL3; TCEA2; JUP; PBXIP1; MAK; HDAC5; NFATC4; HBP1; CALCOCO1; ZNF331; ING4; HDAC9; DAXX; HIVEP1; SOX2; CERS6; HINFP; TSHZ2; NHLH2; HHEX; STAT1; TSG101; NEUROG1; ZKSCAN4; ZNF224; FEZF2; NR0B1; PRDM2; EMX1; ZNF623; CRK; ZNF34; TBPL1; NR5A2; ZNF250; TEAD3; SOX4; ZNF345; CBX7; SALL2; BRDT; KLF11; PGR; TULP2; HESX1; SOX5; NR5A1; ARHGAP35; SND1; JARID2; PHF20; JUN; IRF9; THRB; NRL; ZNF362; SREBF1; EZH1; NFKB2; NR0B2; MYNN; PIAS4; CREM; AIP; ZNF467; CBX4; RING1; MYT1; PHF1; IRF7; ZNF154; L3MBTL1; TERF1; ZNF74; ZNF415; ZNF571; TAF1C; CREG1; SIN3B; CBX2; AFF2; ARID1A; VPS72; ERBB4; DLX4; SRY; SIX5; FOXH1; PBX1; CSDC2; ZMIZ1; BRF2; E2F5; NAB2; ZNF195; PAWR; CERS4; ACTL6B; GATA6; EPAS1; BANP; INSM1; ZNF44; SUPT7L; TRIM24; ZNF165; APBB1; ZNF239; CITED2; KDM5B; ARNT2; PEG3; TLE2; NR4A2; WT1; MXI1; POU4F2; CRYM; ZNF14; ARID3B; GTF2F1; ZSCAN16; OSR2; ESRRG; CBFA2T3; ZNF682; MEIS1; SUPT3H; IRF8; BTG1; ZNF112; CUX2; NEUROD1; STAT2; TSC22D3; ST18; TFEC; SSBP2; BARX1; TSC22D1; EMX2; TRIM33; NR1H4; MNDA; TDP2; ERF; ZNF394; ZNF3; TOX; HIC2; NR4A3; HOXB2; SNAI1; SOX18; SKIL; DACH1; TRIM16; POU2F1; DDIT3; CUX1; CTR9; ZIC3; SPIB; MYRF; SIRT2; SOX13; REL; MAF; ZFPM2; ISL1; JUND; TCF7L2; ZNF611; CNOT3; PHOX2B; HMBOX1; SERTAD2; SOX11; TFDP2; RYBP; AES; ZFHX3; LYL1; ESR1; TCF7; TWIST1; SOX17; INSR; NR4A1; ZNF304; DLX5; BCL3; TRPS1; CALR; RUNX3; HOXB5; BCL11A; STAT4; HEY2; FOXA2; WWC1; CREB3L2; ZNF544; HMG20B; ZNF652; FOXF1; ZNF665; PPARGC1A; IRF1; PITX1; TOB1; NFE2L3; ZNF264; TOX3; HOXD1; CREB1; EHF; MECOM
Down-regulation 119 CCNA2; FOSL1; BRCA1; MYC; ATF1; XBP1; TCERG1; CTBP1; CENPF; PURA; CHAF1B; FOXM1; TFDP1; TP53; SMARCC1; WHSC1; SMARCA4; MYBBP1A; PCBD1; BCLAF1; HMGB1; LEF1; PHF2; NPM1; CBFB; ERBB2; REST; C1QBP; RAN; FHL2; CCDC59; IFI16; SSRP1; HNRNPD; RRN3; NCOR2; BAZ1B; HMGB2; YEATS4; PSMC3IP; CAPN15; DEK; ZFP36L2; ING2; ZNF131; HOXA1; SNAI2; BAZ1A; ING3; BASP1; GCFC2; PMF1; NRIP1; STAT6; FOXC1; CARM1; LZTS1; CENPB; MBD2; EZH2; SMAD5; CBX5; SLC2A4RG; ORC2; SMAD3; KLF4; CIZ1; CBX3; NELFB; SP3; GTF2IRD1; PTRF; EDF1; SUB1; MLXIP; IRF2; ZBTB38; CREB3L1; BRD3; NFKB1; CTNNB1; YWHAB; CNBP; ZNF282; POLR2A; ZBED1; HLF; SIAH2; HMGB3; MAGED1; PTTG1; BATF3; MAFB; KLF5; HES1; SUV39H1; DDX5; TRIM29; TBL1X; KLF2; IRX5; ZNF140; TRIP6; EGR2; TEAD4; TP63; ZEB2; NR1D2; FOXF2; ELK3; ETS2; ZIC1; TLE4; MSX1; KDM5D; FLNA; SMAD1; TBX2; IKZF1