Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID13771 Cgp-60474 GSE70138 HME1 Human 24h 0.12uM EID0116
Types Number Response transcription factors
Up-regulation 319 EGR1; CALR; BHLHE40; SOX5; VENTX; HOXB5; OVOL2; NFATC4; HEY2; CSDC2; PAX8; ZNF154; HOXB13; PRDM14; NFKB2; SOX2; LIN28A; TBX2; THRB; HAND1; SRY; TSHZ2; DLX5; PDX1; GATA1; WT1; TCEA2; RARG; PCBD1; HSF1; HOXD9; KAT2B; ATN1; GLI1; LHX3; SLC2A4RG; ZNF264; ESR2; CRX; PSMC3; ZNF195; PBX2; ZNF493; FOXH1; CREG1; ZSCAN9; ZNF696; JUN; ZNF580; HOXD11; ATOH1; ZNF345; MEIS2; ZNF787; TGFB1; NR5A2; SSX7; MSX1; MAML3; SP140; ZNF816; PHOX2B; SP140L; PRDM1; PHOX2A; SMAD3; HAND2; OLIG2; IRF1; ID3; HIPK2; GBX1; MZF1; SOX3; ASCL3; SREBF2; ZNF223; NANOG; ARNT2; CIC; ZNF695; HDAC6; TWIST1; SALL2; NR5A1; EGR2; ZIM2; TEF; ZNF550; SRCAP; HOXB6; RFX1; NR2E1; PRDM9; AIRE; PROP1; TAL1; SMARCA4; EMX1; NR6A1; CALCOCO1; ZNF350; ZNF362; ZNF814; ERBB4; SOX21; ALX3; DLX4; CBX2; ZBED2; CBX4; CNOT3; SPI1; HSF4; POU6F2; ZNF14; CHD2; MYBBP1A; HOXD13; SOX12; ATF3; ZNF215; NFIX; HOXA3; TAF6L; EHMT2; FOXL2; SPDEF; HOXD3; PKNOX2; KDM5C; DCC; ZNF606; ZNF239; FOXB1; ZNF74; DOT1L; SUPT5H; ZNF133; RFX3; ZNF835; ELF4; PRDM2; BCL11A; ZNF75D; RXRG; EGR3; ZNF467; HOXB3; AR; SCRT1; NOC2L; HNF1B; ZBTB7B; FOXJ1; DBP; ZNF358; KAT2A; SOX17; PEX2; SUPT3H; HIC1; HESX1; ZNF701; ZNF117; CAMTA2; PRMT2; ONECUT2; ZSCAN18; ZNF771; SOHLH2; TAF10; ING4; L3MBTL1; NR4A1; CIITA; RORC; LZTR1; HMX1; ZNF83; THRA; HEY1; GRHL2; ZNF671; MYT1; OVOL1; AFF2; HOXB1; IRF6; ARID3B; ZNF211; FEZF2; POU5F1B; MAFF; E2F4; HOXC5; KLF1; ZNF587; SOX18; ZNF500; KDM4A; LEF1; SSX3; ESR1; MEIS1; PRRX1; TCF15; HDAC9; STAT2; TAF1C; EP300; MXD3; MED15; FOXF2; ZNF93; ZNF682; ZNF506; ZNF3; SP100; PGR; ZNF507; ZFPM2; HOXB2; ZNF544; EVX1; HIC2; SSBP3; NFIC; GATA2; HOXD1; BACH2; SP4; MYRF; RAX; RBBP8; E2F5; LHX6; KLF11; RFXANK; WDR77; ERF; YBX1; NFAT5; SSX1; ELF3; FOS; CRYM; TCF21; HOXC4; AES; ZNF44; CEBPE; MECOM; HDAC5; DAXX; ZFHX3; ZNF205; ZNF512B; CAMTA1; HMGA1; SOX10; HOXD10; HMGXB3; CREBL2; SIN3B; CREB5; LZTS1; NR1H3; WWC1; EGR4; SALL1; TDP2; TERF1; HOXA10; TFDP2; CHD3; BHLHE41; ZNF415; SND1; CBX7; FOXG1; ZEB1; WNT4; EMX2; SKI; ZNF43; RORA; SIX3; DEAF1; MYCN; KAT6B; IRF9; PBX1; TGFB1I1; HOXB7; ID4; ZBTB20; CTNNB1; SMARCA1; HIRA; IRF8; CREB3L2; KLF13; REPIN1; PITX1; NR4A2; GTF3A; ID1; STAT4; ZFP36L2; MYBL1; CD3D; JUP; EYA1; DLX2; PSIP1; EHF; ZFP36L1; PDLIM1
Down-regulation 245 SUZ12; KAT6A; CDK7; TSC22D3; FHL2; ATF6; TBP; XBP1; USP22; BCLAF1; BRCA1; MED6; ATF1; RBM14; CTCF; TCERG1; NCOA6; NFKBIA; BMI1; NFIL3; ZNF84; ZNF263; CNOT1; TRIM32; TMF1; ADRB2; MED1; TSC22D2; CEBPG; SNW1; SFPQ; CRY1; ZBTB18; FOXO3; AATF; ARID4B; HNRNPD; REST; HSF2; TAF5; CCNA2; CHD1; TOB1; STAT3; MTF2; ZNF443; ZNF189; PURA; CCDC59; SP3; SMAD1; ADNP; NFIB; ZMYM2; BRD3; NCOA3; KDM2A; CLOCK; TBPL1; DPF2; CRK; RYBP; BLZF1; ZBTB11; NFYA; ATF7IP; UBE2B; ZNF473; CDK8; KAT7; RNF4; YAF2; THAP1; MED13; ZNF227; MED23; CEBPB; ZNF131; EZH2; ZNF45; RBM39; MED27; SCAND1; RNF111; NFYB; BASP1; RREB1; GABPA; TRIM29; FOXD1; ZFP64; RNF6; HOXA5; PIAS1; ING2; ZHX3; CHD9; CTBP2; PIAS2; CBX5; ARNTL; ZNF266; BAZ1A; MLX; BTAF1; RBPMS; ZNF200; SIAH2; KLF6; CBFB; TAF9; MTDH; KAT5; SMAD4; PBRM1; JAK2; ZBTB38; UBP1; ZNF148; PLAGL2; BRD2; HMGB2; TCF12; SMARCE1; SETD2; ST18; FOXJ3; ZKSCAN5; BTG1; MED20; DDX5; RUNX3; NRBF2; IRX5; VEZF1; TOPORS; RNF138; HOXA1; NCOA4; PMF1; BRD8; PSMC3IP; TOX3; KLF4; RUNX1; PREB; AFF1; TAF7; SAP30; HCFC2; ZNF292; RCOR1; NKX3-1; ZNF410; ELF1; HMGB3; PIR; ZKSCAN1; DR1; MGA; TBL1X; CNOT6; SATB2; NFKB1; NR2C1; PHF20; ATF4; TULP4; ZNF302; NR2F2; PATZ1; CEBPZ; BATF; YEATS4; ABL1; ZBED4; MEF2A; PHIP; NAB1; SUV39H1; CNOT2; TAF9B; TULP3; ING3; NELFB; PSPC1; HMG20A; MED21; SMARCA2; MAML1; CTBP1; SERTAD2; TTF1; PPARGC1A; RRN3; YWHAB; COPS5; ZNF146; TLE1; RBL1; PMS1; KLF9; KDM5A; CITED2; RBBP4; ETS2; AHR; ZIC1; CBX6; MAGED1; ERG; INSM1; ATF5; NR1D2; RXRA; PUF60; EDF1; SMARCA5; SOX9; ELK3; CTR9; JARID2; TRIM22; NCOA1; PCGF2; NR3C1; DACH1; CHD7; TP63; VGLL4; ZBTB16; KLF2; ERBB2; PAX5; IFI16; HOXC6; BCL11B; HOXC10; MAFB; FOXC1; THAP11; ZNF91; MYB; NRIP1; TCFL5