Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID12747 Vorinostat GSE70138 HME1 Human 24h 10uM EID0038
Types Number Response transcription factors
Up-regulation 194 FOXO4; NFIL3; NR4A3; ZNF671; GBX1; HDAC5; TAF1C; JUND; MAFK; STAT1; NR4A1; APBB1; SIRT7; ZNF331; CREM; CALCOCO1; DYRK1B; HABP4; DLX4; HSF4; RAX; TBX10; TOX4; CRK; NR4A2; ZFHX2; ZBTB48; CERS4; HBP1; PRDM12; FOXH1; ZIM2; REL; ZNF212; SPIB; LYL1; NR5A1; ZSCAN32; SRCAP; SIX5; MAK; SNAI1; ZNF778; NOC2L; TSHZ2; EPAS1; TCEA2; CBX4; DBP; KLF12; ZNF536; SALL2; TBX21; NFKB2; TBPL1; EMX1; SIRT2; CSDC2; EBF2; HMG20B; ATF3; GATAD2A; ING1; ZNF10; NAB2; CBFA2T3; SIX1; NR0B2; TAF11; WWC1; LDB1; SND1; CRYM; HMBOX1; EP300; JARID2; DDIT3; CEBPE; RARA; ZKSCAN4; ZNF44; POU2F2; IRF8; ZNF224; ZNF576; SMARCD3; ZNF544; IL16; ZNF593; ZBTB16; EYA1; IRF7; PEG3; CREG1; BANP; GTF2F1; HDAC9; RORC; NFE2; MYT1; CREB5; SIN3B; OSR2; NR1H4; RYBP; RARG; BACH2; CHD8; CBX7; NR0B1; SSBP3; ZNF239; ZNF304; EHMT2; SUPT4H1; CAMTA1; PBXIP1; ERBB4; TCF15; CITED2; TCF7L2; STAT3; ZNF394; ZNF500; TRIM24; TERF1; ZNF516; RBBP5; ZNF688; PAWR; HOXC10; L3MBTL1; NFAT5; KLF13; CTR9; PPARGC1A; ZSCAN16; WNT4; MXI1; CD3D; ZNF611; INSR; HEY2; SIX2; NR3C1; ZNF467; ZKSCAN1; SSBP2; ZNF195; INSM1; PAX5; TOX; ZNF175; SPEN; STAT4; FOXO3; ISL1; ZNF205; ASCL1; TRIM16; SMARCD2; HHEX; EGR3; IRF9; MEOX2; ID3; ZNF160; ZHX2; CUX1; ZFHX4; MYCN; FOXC1; MAF; ZNF652; TOX3; TAF10; AHR; FOSL2; BCL3; SOX11; HOXD1; TOB1; TBX3; BTG1; NFATC3; ZNF91; ID2; WT1; JUP; ZNF423; DACH1; TSC22D1; ARNT2; CREB1
Down-regulation 109 CCNA2; BRCA1; HMGA2; MYC; PCBD1; FOSL1; CENPF; XBP1; FOXM1; ATF1; WHSC1; TFDP1; DEK; HMGB2; FHL2; HMGB1; ERBB2; DNMT1; ATF5; NUP62; BCLAF1; WDHD1; ZFP36L2; HNRNPD; PTTG1; RRN3; NCOR1; PHF2; RAN; C1QBP; SNAI2; LOXL2; GCFC2; REST; PPRC1; CBX3; PUF60; KLF5; CBFB; ZBED4; SMARCC1; SP140L; TEAD4; TP53; SP3; SSRP1; RBM14; CHD3; RBM39; TRIM29; STAT6; STAT5B; IFI16; ZMYND11; ELF1; TAF9B; ARL2BP; UBE3A; HOXA1; RFX7; TRIM22; MYB; UBP1; TCF4; NFKB1; IRF2; YEATS4; CBX5; PMF1; BASP1; MAGED1; HIPK3; SMARCA2; ELF4; SUB1; TGFB1I1; ELK3; RBBP4; FOXE1; SMAD3; CEBPG; TLE4; NPAS2; TGIF1; SLC2A4RG; ABL1; NRIP1; TCERG1; WWTR1; TP63; RBBP7; NKX3-1; SIAH2; YWHAB; SUV39H1; ZBTB38; ZNF512B; FLNA; CTNNB1; ZFP36L1; HMGB3; PIR; PBX3; ESR1; HOXB7; LEF1; EYA2; BHLHE41; KDM5D