Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID11710 Withaferin-a GSE70138 HME1 Human 24h 10uM EID0015
Types Number Response transcription factors
Up-regulation 710 PRDM14; ZNF223; HESX1; ZNF695; NR6A1; ST18; SOHLH2; NEUROD6; FEZF2; CHD2; ZNF778; ASCL3; ZIC3; TBR1; AFF2; ZNF132; ZNF257; TULP2; ZNF141; PPARA; ZNF10; NEUROD2; SOX3; ZNF154; ID4; ZFP2; ZIM2; AIRE; BCL11A; GCM1; TFAP2A; SOX5; RORB; ZNF221; ZNF711; LHX3; ZNF345; ZNF493; ZKSCAN4; POU1F1; ZNF331; ZNF492; ZNF484; ETV3; PRDM9; NEUROD4; ZNF235; ZNF471; BRDT; PNRC1; SOX21; CALCOCO1; THAP9; GCM2; HEYL; CIITA; RFX3; ZBTB44; GLI2; PRDM16; ZNF682; ZNF440; IKZF3; PRDM1; VGLL1; ZNF155; SSX7; ZNF117; ZNF749; ZNF675; SOX4; ZNF613; PROP1; ZNF225; ZNF214; ZNF222; RNF2; ZNF157; PRDM2; ZNF701; SCRT1; TUB; HOXB8; FOXE3; NEUROG2; NPAS1; ZNF80; ALX4; ZFPM2; HOXC8; HES2; ZNF780B; NFKB2; ACTL6B; ZSCAN9; RBPJL; PAX1; POU6F2; WHSC1L1; ZNF334; ZSCAN2; ZNF407; ZNF343; WT1; NFKBIB; ZNF208; ATF7; CBL; SP4; ZNF81; GRIP1; STAT4; TBX5; ZBTB3; TBX19; MAML3; E2F2; POU2F3; TCEA2; CBX2; CBX8; E4F1; ZNF442; ESRRB; GBX1; ZNF234; ZNF688; ZNF415; KLF8; ZNF835; TBX6; ZNF814; TFDP3; ZNF674; ZNF254; ZNF391; NEUROG1; FOXH1; ZNF549; ZSCAN16; FOXE1; ZNF589; NR4A1; ZBED2; TEF; SIX6; NOCT; HSF4; ZNF165; PAX4; PRDM10; ZNF816; MSX2; NR1I3; ZNF669; GTF2A1; SOX14; TBX4; ALX3; MED31; NHLH1; PKNOX2; HOXA2; ZNF133; BARX2; HOXD12; CDX4; MAPK8IP1; SRY; ZNF174; NR5A1; DOT1L; CARF; FOXL2; RFX1; PRDM5; ZNF550; MBD4; ZNF500; TGIF2; ARID3B; ZKSCAN8; ZXDB; FOXP3; FOXJ1; ZNF79; ZNF180; NACA2; VHL; POU3F3; PAX3; BNC1; HAND2; HOXA6; MAK; NKX3-2; ONECUT1; LIN28A; LHX2; ZNF350; FOXD2; HINFP; TBL1Y; TAF7L; TULP1; SOX1; POU3F4; FOXD3; HNF1B; CSDC2; MEIS2; GSC2; ZNF286A; TLX3; NHLH2; POU6F1; ZNF75D; PDX1; AFF3; ZNF253; RORA; THRB; ZNF536; THAP3; NR5A2; ZXDC; SCAI; SOX18; ZNF41; ZIC4; EMX1; ZNF770; HHEX; ZNF423; ZNF362; ZNF43; HNF4A; DCC; MED12; ZNF667; FOXN1; HOXA3; POU4F2; MYF5; ZNF264; PAX7; ASH1L; POU4F3; EYA3; CIR1; NEUROG3; ETV7; GBX2; MED25; HOXB5; FOXC2; ARID3A; ZNF250; PROX1; ZBTB6; ZNF287; NEUROD1; NFIX; NRL; KDM5C; YBX2; TLX2; ZNF135; ZNF224; PRDM13; ZNF74; RFX2; MYEF2; ZNF611; PQBP1; NKX6-1; SHOX; TP73; DBP; VENTX; MLLT1; KMT2D; NR4A3; CDX1; RING1; HOXC11; ASCL2; ZNF507; OVOL2; ETV2; ZNF573; CRTC1; CBFA2T3; INSM1; LHX5; HOXD3; SKIL; IFNB1; CRX; SPIB; ZFP69B; PEX14; VSX1; ING1; ING4; CBFA2T2; CDX2; SSX3; ZBTB43; ETV6; TAF6L; BRWD1; ZNF85; LZTR1; PHOX2A; ATOH1; HBP1; ZBTB20; HIF3A; ZFP37; SOX30; ZBTB7C; ZNF606; INSR; ZNF93; ONECUT2; PITX3; RFXAP; ZNF324B; HNF4G; TAF1C; BNC2; ZNF696; UTF1; HIVEP1; STAT2; HAND1; OVOL1; NR2E1; NFATC4; NKX2-8; SNAI1; E2F1; RXRG; ZNF35; E2F4; MYF6; ZNF506; IKZF4; LBX1; NANOG; ZNF175; ZNF124; EGR1; TCF4; ZBED1; TBX1; FOXL1; NR1H4; BACH2; ZNF219; ZNF768; FEV; TTF2; ESR2; HOXB1; MAFK; HOXC5; ZBTB7B; FOXB1; ZNF460; NFE2; TAF5L; L3MBTL1; SPI1; TRIM33; WNT4; PEG3; ZKSCAN3; CDIP1; ATF3; ZNF771; KLF15; ZNF142; LMO1; ZNF273; GATA1; REL; HDAC9; DYRK1B; CUX2; PRDM8; NR2F1; MYBL2; TFAP2B; DMRT1; TONSL; ZSCAN18; ZNF480; SNAPC4; ZNF623; MYCN; E2F3; EHMT1; HDAC11; PPARD; ZNF232; ZNF304; FOXI1; ZNF764; TFAP4; NKX2-5; ZNF112; RARG; ZFY; POU5F1B; RELB; HIC1; CNOT3; EVX1; MZF1; PRDM12; TLX1; PAX2; KLF11; LZTS1; ZNF426; ZNF557; SUV39H2; MXD4; PITX2; ZNF787; ARNT; PHOX2B; ZNF562; ZNF516; TSHZ2; NR0B1; MAP3K10; ZFHX2; ELF4; PML; ZNF202; MYBBP1A; ZNF215; SPDEF; ZNF358; ID3; IRF6; PGR; HOXD13; GLI1; CEBPE; APBB1; ZNF671; CIC; SALL2; NCOA2; BARX1; ZNF177; SIM1; SUPT6H; HOXB3; GMEB1; SOX13; SAFB; TBX21; ELF3; ZNF248; KMT2B; DACH1; LMX1B; VPS72; YEATS4; NR2C2; ZNF329; HMX1; NR0B2; ZNF446; HOXD1; TWIST1; TBX10; ELF5; ZSCAN31; KLF3; NR4A2; ZNF239; FOXF2; PSMC3; JUP; FOXG1; HOXD9; POU4F1; TEAD4; DLX2; TFE3; CDK9; PAX6; ZNF576; SKI; ZNF813; ZNF571; ARID5A; TCF7L2; ATN1; EZH1; ZKSCAN7; ZNF419; TFEB; TFAP2C; GFI1B; MECP2; IRF1; PBX1; ZNF580; SOX15; ZNF529; LYL1; SOX17; MBD3; CREM; HLX; CARHSP1; ZFX; TGFB1I1; THAP7; TRIB3; TCF21; IRF3; ZNF646; POU2AF1; TFDP2; ZNF91; POU3F2; TRIM25; ESR1; MYT1L; LHX1; HDAC5; CBX7; ZNF544; ZBTB48; ZNF528; HOXB6; CAMTA1; TAF1A; MEF2C; VAX2; SMARCB1; MLLT10; ZNF556; SUPT5H; RORC; TEAD3; ZNF136; CEBPD; ZNF444; TOX; TLE2; TRIM24; TAF4B; ZNF205; CAPN15; IRF5; CAMTA2; ZBTB17; HNF1A; DLX5; ZNF665; PRRX2; ZNF195; MAFG; FOXJ2; THRA; AR; ZNF268; MXD3; PLAGL1; MXD1; NR1I2; HSF1; POLR3C; SSBP3; PIAS4; GFI1; GRHL2; EP300; SP140; SOX12; EBF2; SIX5; SETDB1; BLZF1; GTF2IRD1; DLX6; SUPT4H1; POU2F2; THAP4; SIX3; CBX4; E2F8; AEBP1; ZNF593; TERF2; HIC2; ZNF160; LDB1; HOXB2; ERBB4; MDM2; RAX; ZNF44; DLX4; CREBL2; HLF; IRF7; PLAG1; NR1H2; PRRX1; ZBTB32; SMAD6; PCGF3; ZNF8; TFEC; CEBPG; SOX10; CERS4; MEOX2; SIN3B; CEBPA; EGR4; HOXD11; ZNF34; MEF2D; IRX4; NAB2; ZNF532; EPAS1; MYOG; HIPK2; TLE4; PHF1; MNDA; FOXO1; HOXB13; RSF1; TULP3; GATA4; BHLHE41; PAWR; HMBOX1; ZNF467; CITED1; ZEB1; NKX2-1; CREBZF; TCF3; IL16; BCOR; NFIC; ERG; SHOX2; ZNF134; ZNF551; KLF13; BANP; ZNF692; SRCAP; IRF8; MEIS1; IRF9; NFAT5; SOX11; PITX1; OSR2; NFE2L3; SOX2; TRIM29; GATA2; CRYM; SALL1; IRF4; FLI1; MAF; ARNT2; ID1; RXRA; EN1; PBX3; GMNN; KLF5; MYCL; FOXN3; ISL1; TDP2; TCF7L1; MKL2; MXI1; ZNF586; CITED2; EMX2; TGFB1; MYRF; FOXF1; NR2F6; NFATC3; GATA6; MAFB; TBX2; GATA3
Down-regulation 145 IKBKAP; RHOA; TCERG1; SMARCC1; ECD; RNF6; MTDH; EZH2; NRIP1; CBFB; PRKDC; HDAC2; USP22; PSIP1; REPIN1; MYC; PURA; BCLAF1; UBP1; FHL2; HOXC6; MYCBP; SP3; REST; FOXO3; ATF1; YWHAB; CENPF; NEDD8; SMARCA5; TFDP1; NPM1; NCOA4; MED1; TCF12; ZBTB11; HMGB1; HOXA5; MAGED1; ADNP; HMGA2; RCOR1; BRD8; CNOT1; HDAC1; MBD2; RAN; CRK; TBL1XR1; JARID2; SND1; RBBP4; ZBTB1; BAZ1A; ZMYM2; RBM14; CCNA2; NCOR2; BIRC2; SNW1; ELF1; RNF10; BAZ1B; NCOR1; HLTF; MED24; CBX5; CRY1; VEZF1; YBX1; SUB1; TRIM32; WWTR1; ZNF146; KAT6A; MED6; SMAD2; ITGB3BP; CTR9; PCGF2; ZMYND8; BMI1; BRCA1; RNF4; PSPC1; ZNF24; AFF1; BHLHE40; NCOA6; ENO1; IRF2; FLNA; SMARCE1; RBBP7; ADRB2; TAF4; SMARCA2; DDX5; SFPQ; NKX3-1; HOXB7; MED23; LOXL2; PBRM1; ELK3; LPIN2; NCOA1; PPARG; SIAH2; CBX3; DEK; IRX5; HNRNPD; GTF3A; SERTAD2; HSBP1; NR2F2; RNF138; PTTG1; SETD2; TRIM16; ZMYND11; VGLL4; RBL2; TSC22D2; ASH2L; STAT6; CREB5; ZBTB38; BBX; ZKSCAN1; TRIM28; BCL11B; NFIB; RBBP8; HMGB2; CHD9; LEF1; MNAT1; BRD2; BASP1; EYA2; IFI16; MYBL1; TSC22D1