Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID11485 Withaferin-a GSE70138 HME1 Human 24h 10uM EID0014
Types Number Response transcription factors
Up-regulation 749 GATA2; MEF2C; POU2F3; GLI2; ZKSCAN4; PRDM9; ZBTB3; RFX1; ZNF142; ETV2; SCAI; ZNF157; TLX3; ZNF154; RFX3; MAK; ZNF250; FOXB1; SOX17; ZNF613; BCL11A; ZNF816; JUP; GRIP1; CHD2; ZNF423; ZNF175; LYL1; GCM2; NAB2; PRDM16; ZNF780B; NHLH2; MLLT1; HOXA2; FOXE3; TBR1; ZBTB44; SSX7; THAP7; SCRT1; ZNF471; RBPJL; SIX6; POU1F1; ETV3; NEUROG2; HOXD12; ZNF749; MYBL2; CIITA; FEZF2; ZNF407; ZBED2; SOX14; PCBD1; NEUROG3; ETV7; POU4F2; ZNF81; ZNF214; SOX5; HDAC9; ZNF484; PAX3; LBX1; THRB; ST18; MSX2; SOX2; CBFA2T3; FOXH1; VENTX; NR1H4; GTF2A1; ZNF132; NFKB2; SOHLH2; HINFP; ZNF350; ACTL6B; ASCL2; ZSCAN2; NACA2; ZNF674; MAML3; NFIX; PAX4; ZNF155; TCEA2; ZNF80; ALX4; AR; NR5A1; ZNF195; TBX6; RUNX2; POU3F4; LIN28A; HNF4A; NEUROD4; EMX1; ZSCAN31; ZNF814; ZNF669; ZNF549; TULP2; RING1; ZNF362; VHL; HOXB8; FOXC2; POU6F2; TFEC; ZIC4; FOXO4; FOXD3; ATF7; ZNF234; ZNF324B; PRDM2; ERBB4; PAX8; MYCL; SUV39H2; ONECUT2; CDX4; ZNF257; ZNF41; ZIC3; ZNF225; SAP130; CUX2; TLX2; ZSCAN9; TBL1Y; TBX5; SSBP3; KLF8; LZTR1; GSC2; ZNF415; BARX1; SOX3; SNAPC4; THAP9; ZNF682; ZNF136; HOXA6; PDX1; RSF1; SRY; FOXP3; ZNF331; TBX1; CBX8; ALX3; ZNF695; TEF; HES2; TULP1; ZNF235; POU4F3; ZFPM2; TFDP3; ISL1; ZNF34; ZNF221; DMRT1; GCM1; TGIF2; NR6A1; E4F1; SALL2; DLX4; HIF3A; TBX4; ZSCAN16; ZFHX2; THRA; ONECUT1; FOXL1; FOS; GFI1B; ZNF208; RORB; SP1; SOX1; PAX1; DOT1L; BRDT; ZNF391; SOX21; RXRG; MAPK8IP1; SUMO1; TBX19; ZNF74; CRX; MYEF2; ZNF343; ZBTB7C; ZNF93; NR2C2; ZNF442; HOXD13; ZNF334; TULP3; NFE2; NR1I3; GBX2; CALCOCO1; NFATC4; ZNF764; TP73; GMEB1; ZNF91; ZNF688; L3MBTL1; ZNF264; NKRF; ZNF778; EYA3; ESRRG; PRDM14; IKZF3; NPAS1; PRDM10; ZKSCAN8; LHX1; ZNF493; VGLL1; MYF5; HAND2; DYRK1B; ZNF35; ZNF254; ZFP2; HOXC8; HESX1; ZNF223; ZXDB; MYT1; ZNF550; MED31; ZNF492; ATOH1; ESRRB; IKZF4; CEBPA; ASCL3; ZNF667; HAND1; ZNF79; ZNF770; PAX7; ZNF273; HNF1B; SIX5; SALL1; SKIL; PPARA; WT1; PAX9; HNF4G; SOX18; ZNF135; TFAP2B; CRYM; HIC2; ZNF197; DCC; E2F4; SPDEF; PAX6; SIM1; LMO1; NEUROD6; ZNF345; EYA1; ZFHX3; PRDM12; CIR1; NKX2-5; ZNF253; HOXA3; PRDM13; REL; FOXN1; ZBTB48; HOXD9; RFX2; LHX3; HEYL; ZNF232; INSM1; GMNN; ZNF552; CARF; POU2F1; NR1H2; ZNF215; ZNF710; BNC1; SOX30; NKX6-1; CBX4; FOSB; ZNF500; TAF6L; HOXC4; RNF2; ESR2; ING4; DACH1; PHOX2B; SSX3; SMARCA4; IRF5; HIVEP1; KLF11; ZNF460; ZNF124; ZNF133; TFDP2; YAP1; ZNF16; CDX2; ATF3; BANP; TONSL; ZNF675; APBB1; PAX2; NFKBIB; EMX2; ZNF224; ARID3A; GABPB1; CNOT3; ZNF668; WHSC1L1; ZNF701; ZKSCAN7; NRL; CBX2; PAWR; ZNF444; ZNF426; ZNF10; VSX1; ZNF606; PITX2; NEUROG1; PEX14; AFF3; THAP3; POU3F3; ZNF141; ESR1; SIX3; MED25; TUB; CDIP1; SP4; IRF6; ZNF528; SHOX; TAF1C; RFXAP; IKZF2; TCF21; FOXI1; ID3; FEV; ZNF671; ARID3B; ZNF696; HOXB1; SOX12; RORC; TLX1; IFNB1; NEUROD1; GBX1; FOXE1; ZNF813; RELB; TEAD3; MYOD1; MEIS1; LMX1B; NR4A1; DLX6; TLE2; ZNF646; IRF1; ZSCAN32; PITX3; ZNF287; ZNF33B; NOCT; ZNF536; ARID5A; VAX2; ZFP69B; ZNF507; ZNF571; ASH1L; EHMT2; MEOX1; ZBTB39; ZNF202; NEUROD2; ZNF574; ZNF768; ZFY; CREM; TRIB3; WNT4; CSDC2; ZBTB7B; ZNF440; FLI1; TCF7L2; ZNF286A; ZNF771; CAMTA2; NHLH1; POU3F2; PIAS4; TRIM24; PNRC1; NR4A3; UTF1; NR0B2; MYF6; RARB; PLAGL2; ZNF174; AIRE; ZNF394; KDM5B; KLF13; HDAC5; IRF9; MYCN; ZNF205; PRRX1; ARHGAP35; NFE2L2; ZNF430; SUPT4H1; E2F6; PEG3; KMT2D; HOXB13; ZNF529; MSL3; CEBPE; ZNF835; ANKRD1; SMARCD1; TOX; RELA; ZNF239; CIC; ZNF44; ZIM2; EP300; HDAC11; ZNF304; ZNF506; PROP1; AFF2; POU5F1B; ESRRA; YBX2; MEIS2; ZNF180; FHL5; POLR3F; ZNF85; ZNF467; ZHX2; TCF15; CDX1; ZKSCAN3; KAT5; ZNF222; ZNF473; PLAG1; TAF1; BACH1; ELF3; HIPK2; TAF4B; DLX2; PRDM5; AFF4; NKX3-2; ZNF165; PROX1; HMX1; ZNF248; ZNF117; BNC2; PHOX2A; HOXB2; SNAI1; ZFP37; OVOL2; ZNF711; ZNF410; IRF8; ZNF573; MNDA; TAF7L; PBX1; ARNT; BCOR; MZF1; HOXB3; KAT2B; VPS72; NR5A2; BAZ2A; ZNF787; ZNF75D; TSHZ2; KDM5C; ARRB1; SMARCC2; SMARCD3; CBFA2T2; MEOX2; ZNF14; HBP1; STAT2; BARX2; PBX2; IRF7; ZNF611; RFXANK; MEF2D; NANOG; ZBTB6; ZNF480; SMARCA1; CREB5; PKNOX1; SRCAP; ZNF544; POU2AF1; SPI1; CUX1; ZNF219; SOX11; MED16; KLF15; BRWD1; FOXJ1; HOXD3; FOXA1; ZNF557; PKNOX2; HDAC4; E2F8; CAMTA1; MECP2; PCGF1; POU6F1; ZNF556; NR1I2; TFEB; SRF; CREB3L2; PRDM1; ZNF623; TCF4; ARID5B; PHIP; EHF; ZNF580; AES; ZFHX4; KAT8; MAFK; TRIM22; ZKSCAN1; AEBP1; ZNF432; ACTL6A; GRHL2; HHEX; ZSCAN18; BAZ2B; MXD4; CBX7; MXD3; CREB3; PGR; ZNF177; ZNF329; HOXB9; NR0B1; MEN1; ZXDC; RARG; MKL1; HOXC11; HOXB5; EZH1; SIX2; PITX1; ING3; ZBTB43; ZNF665; OLIG2; LZTS1; TOX4; DBP; MYOG; OVOL1; GLI3; ZNF112; TFAP2A; ZNF43; KLF4; ZNF8; SUPT6H; GATA1; GON4L; HES1; CRTC1; GLI1; SMAD6; TAF6; E2F5; TAF1A; PMF1; TAF7; MLXIP; HLX; HEY2; ZBTB17; TERF2; ID4; KLF3; MED12; TTF2; SMARCB1; ZNF652; LMCD1; CREBL2; NR3C2; SETDB1; AIP; POU2F2; HLF; HSF1; SKI; KAT6B; MLXIPL; CEBPG; ZNF148; YEATS2; TAL1; ELF4; HIRA; GTF2IRD1; ZIC1; DEAF1; JUNB; ZNF589; LHX2; FOSL2; MSC; ZNF107; ARID1A; HOXB6; CREB1; GATA6; NFIC; NKX2-1; CAPN15; MXD1; DLX5; ID2; TOX3; WWC1; CERS4; MECOM; SPIB; THAP4; CEBPD; PLAGL1; HOXD1; SSX1; PCGF2; TP63; ZBTB20; TCF7L1; RBPMS; JAK2; TWIST1; NR4A2; DMTF1; TGFB1I1; SMAD1; ARNT2; OSR2; TDP2; ZNF354A; ID1; NFE2L3; BIRC2; GATA3; ZNF551; BHLHE41; CTBP2; ERG; PPARGC1A; INSR; STAT4; VDR; CITED2; HOXC10; ZNF160; REPIN1; ATF5; NPAS2; FOXF2; CBX6; ZNF83; HMGA1; PBX3; NKX2-2; FOXF1; TBX2; MYB; NR2F1; E2F2; BACH2; TXNIP; MAFB; FOXG1; IKZF1; NFATC3
Down-regulation 144 RHOA; TCERG1; HDAC2; NCOA4; CCNA2; CENPF; ATF6; NRIP1; MYC; ENO1; MTDH; HNRNPD; CBFB; BRD8; ECD; RBBP4; JARID2; PRKDC; RNF6; PTTG1; FOXJ3; SMARCA5; EZH2; TSC22D3; CCNC; HMGA2; ARNTL2; NFIL3; USP22; ELK3; SMAD3; MED23; ITGB3BP; CRK; SMARCC1; HDAC1; HDAC6; YWHAB; BAZ1A; MYCBP; ELF1; TLE1; EDF1; URI1; NFE2L1; NR2F2; ZNF146; SREBF1; SUV39H1; ZBED4; HLTF; REST; DDX5; ENY2; LPIN2; PURA; LOXL2; TFDP1; TRIM32; RNF4; FOXO3; SMARCE1; SUB1; CTNNB1; SAP30; HMGB2; NCOA6; ZBTB1; SIAH2; KLF9; PIAS3; ZBTB11; CNOT1; FOXD1; C1QBP; BMI1; XBP1; RAN; TCF25; CDC5L; BCLAF1; CEBPB; HOXC6; ATF1; MKL2; SNW1; FLNA; MAGED1; BLM; SMARCA2; SFPQ; LIMD1; RCOR1; PMS1; UBP1; ATF4; ETV5; NUP62; RUNX1; CBX3; KAT6A; NR3C1; AFF1; NCOR2; HSF2; RREB1; XRCC6; RBM39; MED24; ETS1; HOXA5; TBL1XR1; TBL1X; CHD9; SPEN; YBX1; SMAD2; COPS5; NRBF2; APEX1; HOXA1; WHSC1; MED1; DEK; PSIP1; RNF14; MYBL1; PPARG; SP3; SNAI2; ABL1; CTR9; IKBKAP; ZNF217; ARID4B; HMGB3; TRIP6; RBPJ; SOX9; KLF2; SOX10; ZMYM2; BCL11B; STAT3