Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID11258 Withaferin-a GSE70138 HME1 Human 24h 3.33uM EID0013
Types Number Response transcription factors
Up-regulation 504 FOS; EGR1; NR4A2; SOX3; CCNH; MAK; JAK2; SOHLH2; FOXG1; RFX1; SSBP3; TBR1; NANOG; ISL1; SOX18; LIN28A; ZFPM2; ASCL2; SCAI; ZNF770; WT1; KLF11; PPARA; CARF; SRY; RFX3; ZIC3; RARG; SALL1; CSDC2; ZNF334; LBX1; NR4A1; PRDM9; ZNF816; SOX1; ZSCAN31; ZNF573; SOX17; PRDM10; ETV3; VENTX; POU6F1; ANKRD1; MED31; ATOH1; E2F2; HOXA2; ZNF235; ZNF835; FOXH1; ZNF221; NR1H4; SOX2; HOXC5; HOXB1; PRDM5; ZNF440; ZNF423; ZBTB3; ZNF549; ZFP2; THRB; DOT1L; ZNF136; NR2F1; CUX2; PAX8; ZNF331; ZNF778; HDAC11; CBL; NFIX; ZIM2; ZNF253; CHD2; ZNF571; CBFA2T3; THRA; ZNF682; SSX7; FOXJ1; RBPJL; TBL1Y; FOXD3; ZNF500; ONECUT2; ALX4; HNF4G; FOSB; PRDM1; RORC; SOX14; ZNF154; PRDM2; ZNF701; ZNF507; ZNF467; SCRT1; CDX1; ZIC4; WNT4; SSX3; NR6A1; FOXB1; ZNF93; EYA1; ZNF157; ZNF407; IKZF3; HOXA6; ZNF345; ZNF208; SHOX; ZNF780B; GCM2; NEUROG2; NEUROD4; ZNF214; ZNF471; ESRRB; ESR1; KLF4; NAB2; LHX1; EMX1; HOXD3; ZKSCAN7; ETV2; ZNF85; ZNF75D; ZNF675; SOX13; ZNF528; ONECUT1; TCF21; KLF8; E2F4; IKZF2; PRDM12; EGR2; PAX4; ZNF613; RXRG; VHL; ZNF814; NHLH1; MLLT1; ZNF232; CITED2; POU3F2; MYBL2; MAML3; ZNF225; ZNF81; ZNF695; FOXE3; POU2F3; TEF; ID4; ARID3A; TAF6L; GON4L; HEYL; PIAS4; NR4A3; HOXB2; HESX1; HOXD12; ZNF273; ZSCAN18; THAP9; ZNF532; TGIF2; TFDP3; ZNF426; RAX; ZXDC; ZNF415; FEZF2; CBX7; PKNOX2; PRDM14; GCM1; CEBPZ; CDX4; ZNF33B; ZNF141; HIC2; POU3F3; ZNF391; MEIS2; NFE2L3; TP73; LHX3; CIITA; CREM; TULP2; TLX3; PRRX1; EGR4; GBX1; GSC2; ZNF442; CALCOCO1; AR; ZNF80; POU6F2; ASCL3; ZHX2; NEUROG3; MYCL; NEUROD6; ZNF671; ZNF215; HOXD13; ZEB2; GBX2; ZNF674; ZNF287; PAX1; CBFA2T2; NPAS1; PCGF3; DLX5; GLI2; HIF3A; NR0B2; HIPK2; ZNF155; HINFP; ZNF174; SMAD4; TAF4B; TCEA2; ZFP37; FLI1; AFF2; GRHL2; BRDT; ALX3; PITX3; SNAI1; POU4F3; AEBP1; ZBTB44; KLF13; MEOX2; ZNF254; FOXN1; GRIP1; UTF1; ZNF35; NFATC4; ZNF611; ZNF550; NR5A1; ZNF257; SAP130; PDX1; THAP7; PROP1; POU4F2; LMCD1; TOPORS; HNF1A; NFE2; HIC1; FOXI1; ZFP69B; ZNF10; STAT2; MXD1; ZNF239; CEBPG; NR1I3; NKX3-2; EMX2; ZNF749; CBX2; ZNF117; ZNF688; OVOL1; ZNF552; CRTC1; BCL11A; SP4; ZSCAN9; ZNF223; SOX11; MEF2C; GATA6; ESRRG; LHX6; PAX6; SALL2; SP1; HOXD9; ZNF177; ZNF362; TFAP2A; ZNF771; ZNF692; NEUROG1; POLR3C; THAP4; ZNF350; BRWD1; DMRT1; E4F1; NEUROD2; POU1F1; IRF6; ZNF83; NR3C2; HOXD1; DCC; ZNF529; SOX21; REL; RARB; KDM5C; CDIP1; YBX2; ZNF74; HOXB8; TCF7; HOXA3; ZNF43; HBP1; ZKSCAN4; ZNF492; TAF5; MED25; ZNF586; ARNT2; ZNF140; HSF4; TSHZ2; FOSL2; DACH1; ZNF112; PROX1; SIX6; RSF1; HEY2; ZNF268; CRX; ZNF222; ST18; BHLHE40; BNC2; RARA; ZNF516; HDAC4; ERBB4; ZNF654; ZNF665; GATA1; TBX1; CAMTA1; ZNF304; ING4; LDB1; ZKSCAN8; SIM1; NFATC1; HOXD11; EP300; ZNF444; KLF3; PFDN5; ZNF711; MYRF; THAP10; ZNF180; CRYM; TTF2; PGR; JUND; HSF1; NR5A2; SPDEF; POU5F1B; APBB1; NFATC3; ACTL6B; MNDA; HOXB5; VDR; SIX3; NFIC; PAWR; ZNF224; NHLH2; ZSCAN16; PNRC1; MYF6; HLX; TAL1; MECP2; STAT4; BARX1; RORA; TEAD3; SKIL; ZNF34; JUN; PBX1; TEAD4; OSR2; ZNF354A; ZNF623; FOXL2; MEIS1; HOXC4; ZNF667; HOXB13; SSX1; ZNF107; HOXD10; UBE2B; ID2; ZNF131; EN1; INSM1; CERS6; JUNB; MYBL1; ZNF195; TLE4; VGLL1; BNC1; ZFHX4; TRIB3; IRF9; TULP3; HDAC9; CERS4; PHIP; SMARCD3; SUPT4H1; NR0B1; EHF; BHLHE41; ZNF91; KLF1; EGR3; RBFOX2; SHOX2; KAT2B; TRPS1; NEUROD1; ATF3; DAXX; NCOA3; ZEB1; HHEX; GTF2IRD1; FOXE1; PEG3; PBX3; MECOM; FOXA2; CCNE1; BACH1; ARID5B; TWIST1; KAT6B; TBX21; FOXN3; MYCN; HOXB6; DLX2; NPAS2; KLF2; TFAP2C; BACH2; SMAD6; CTBP2; PLAGL1; ZBED2; NR1H2; ID3; TFEC; FOXF1; ZNF165; TCF4; ZNF589; ZFP36L1; ZNF264; MXI1; TGIF1; HLF; THAP11; VPS72; INSR; SATB2; HOXA11; GATA2; TOX; ID1; IKZF1; HOXA10
Down-regulation 110 MYC; CCNA2; NFKBIA; VGLL4; YBX3; MTDH; RHOA; HLTF; SUV39H1; HDAC6; FLNA; NUP62; BLM; ENO1; CBFB; NEDD8; HDAC2; SPEN; MYCBP; NFIL3; USP22; XBP1; PDLIM1; BMI1; ATF1; CENPF; ZBTB11; NRIP1; HMGA2; BRCA1; NCOA4; RUVBL2; CRK; SMAD3; MAGED1; EDF1; BCL3; NFE2L1; ASH2L; PRKDC; RBBP4; SOX10; POLR2A; MED6; IKBKAP; PURA; PBRM1; ELF1; ELK3; RCOR1; SMARCE1; PTTG1; NFKB1; STAT3; RBM14; CTR9; CENPB; DEK; ECD; ETV1; AFF1; RNF4; DDX5; SMAD2; HMGB3; SIX1; CITED1; HNRNPD; MEF2A; MED1; JARID2; FOXC1; ZBTB1; BRD8; FOXJ3; SFPQ; YBX1; BBX; TAF1D; HDAC1; WWTR1; BIRC2; NKX3-1; RNF14; HTATIP2; ZBTB38; RBBP7; ZMYM2; KLF10; TRIP6; MKL2; TAF10; HSBP1; ETS2; BTG1; RUNX1; ZMIZ1; ADRB2; CALR; SREBF1; LITAF; RLF; BCLAF1; NR3C1; IRX5; HMGN3; GTF3A; NR1D2; CREB3L2; HOXC6