Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID08467 Withaferin-a GSE70138 HA1E Human 24h 10uM EID0011
Types Number Response transcription factors
Up-regulation 803 ZNF154; LHX3; PRDM14; CHD2; EMX1; PRDM9; SRY; ZNF701; SIX6; THRB; NR6A1; ZNF814; SOX18; MEF2C; ZKSCAN4; FOXE3; TULP2; FOXH1; ZNF695; TP73; RFX3; HESX1; MAML3; NEUROD2; RFX1; NR5A1; SSX3; SCRT1; POU6F2; ZNF132; VENTX; ZNF221; TBX5; ZNF682; GRIP1; FOXD3; AFF2; ZNF257; ZNF550; FEZF2; ZNF442; ASCL3; KLF8; FOXB1; SSX7; PRDM10; NEUROD6; TBR1; PAX4; HES2; POU2F3; ETV3; TULP1; ZNF674; ZNF345; ZNF343; SOX2; ZNF235; NR1H4; CBX2; PAX1; ZIC3; ZNF10; PAX7; SP4; CDX4; DOT1L; BRDT; ZNF157; ZBTB44; SOX5; KLF15; ZNF549; ZNF215; ZIM2; HOXB1; NEUROG2; SOX21; SOHLH2; GCM1; TFDP3; ZNF780B; ZNF391; ZNF362; SCAI; TCEA2; DCC; ZNF135; ZNF225; PDX1; ZFP2; NOCT; POU3F3; ZNF471; POU6F1; ZNF273; ONECUT1; ZBTB3; ETV2; ZNF350; ZNF43; TEF; ZNF778; ZNF80; AIRE; OVOL1; ACTL6B; CIITA; ZNF329; GCM2; POU1F1; VHL; PRDM5; ZNF81; SPI1; NEUROD1; ZNF214; CBFA2T3; NFKBIB; ATOH1; ZNF142; ZNF75D; NEUROG3; ZNF415; MLLT1; ZNF208; TAF4B; ZNF324B; YBX2; HOXB8; SOX14; ALX4; ZIC4; ZNF407; FOXN1; ZNF141; ALX3; HIF3A; ZNF557; ZNF816; CBX8; ZNF573; ZNF492; NHLH1; BNC1; LBX1; POU4F2; ZNF174; NEUROD4; ZNF667; HOXD12; LMX1B; TLX3; ZNF155; GBX1; ASCL2; PRDM16; POU4F3; ZSCAN2; BRWD1; ZNF669; DMRT1; MSX2; GSC2; ZNF331; ZFHX2; ZNF254; HOXC11; HNF4G; ZNF41; ZNF34; PRDM1; ZNF8; ZNF304; ZNF440; TBX6; ZXDC; ZNF234; THAP9; SOX1; UTF1; RBPJL; ZNF507; ZNF688; VGLL1; NR1H2; ARID3B; MYEF2; ZNF222; NR5A2; FOXL1; CBX4; CEBPD; GBX2; ZNF274; ZFP69B; PAX3; IKZF2; HEYL; TAF1C; RARG; NHLH2; IKZF4; ZNF423; ZBTB7B; SOX3; PRDM13; SSX1; PRDM2; ASH1L; ZNF223; CIR1; ZFY; NFE2L2; OVOL2; IKZF3; TLX1; E2F4; BCL11A; ZNF671; ZKSCAN8; SNAPC4; NKX2-5; GATA1; LHX2; TBX1; ZNF287; POU2F1; ESRRB; HIC2; CRX; ZNF675; ZNF74; ZNF536; ATF7; NRL; REL; VAX2; CDX1; RFX2; ZNF613; ZKSCAN3; NEUROG1; MDM4; PROP1; ZNF446; ZNF264; TFAP2A; MED25; CDIP1; TAF6L; ZNF771; ZXDB; SIX3; CBX7; MAP3K10; PRDM12; E2F2; BARX1; FOXJ2; EN1; TLX2; ONECUT2; MED31; ZNF354A; NACA2; ZNF749; ARNT2; ZNF33B; ZNF480; ZNF180; ZNF253; ZNF239; ZNF460; POU3F4; DLX4; ZNF500; ZNF224; ZNF586; ZNF334; FOXJ1; ZNF117; PRRX1; HSF4; WHSC1L1; FOXD2; NPAS1; HOXC5; JUP; ZNF44; SHOX; ZBTB7C; NFATC4; ZNF85; TBX4; HOXA6; RORC; ZNF202; CARF; FOXF2; PLAG1; HOXA3; HDAC9; ZNF493; TAF5L; GFI1B; SUV39H2; ZNF571; ZNF611; CEBPG; ZNF467; SHOX2; TBL1Y; KLF4; ZNF665; RXRG; ZNF711; CUX2; ZSCAN9; ZFPM2; DLX6; HOXD13; GTF2A1; FOXP3; NR0B1; ZNF136; NKX6-1; ZNF835; TUB; SUPT7L; LMO1; TAF7L; TCF7L2; ZNF623; RORB; TONSL; RAX; HSF1; MYF5; MYNN; MAPK8IP1; SOX30; EP300; EYA3; ZNF195; ZFP37; TBX19; SOX13; TAF5; NFIX; MAK; ZNF93; ZNF112; JAK2; IRF6; ZNF770; SKIL; ZNF606; KLF3; ZNF710; CBL; LHX6; ZBTB6; ZNF134; ZNF79; RFXAP; SSBP3; SP1; HOXA2; SMAD9; MDM2; POU3F2; ZNF197; ZNF268; HOXC8; TFAP4; TRIM33; AFF3; CBFA2T2; ZNF250; THAP7; ESR2; LHX5; THAP10; LZTR1; PEG3; VPS72; SMARCA4; ZNF484; ZNF529; THRA; ARID3A; ZNF286A; LIN28A; ZNF473; TBX10; MEOX2; ZNF444; HR; DLX5; ZSCAN32; ST18; ZNF506; RING1; HNF1B; HIC1; ZNF91; ZNF175; KDM5C; IFNB1; PITX3; HIPK2; FOXE1; LYL1; NR1I3; HMX1; PPARA; HDAC11; TGS1; PKNOX2; THAP3; CNOT3; CREM; TAF1; ING4; CAMTA2; ZNF544; TFAP2B; HINFP; MZF1; ZBTB16; CSDC2; NKX3-2; BARX2; ZNF668; ZBTB39; ZNF124; FHL5; IRX4; DYRK1B; PAX2; ZNF528; ZNF639; TAF1A; ZFP30; INSR; PAX9; HOXD1; EN2; YEATS4; TLE2; MYT1; CRTC1; MNX1; PIAS4; MEIS2; JUN; POLR3C; TSHZ2; ZNF696; HNF4A; CNOT2; HLX; NANOG; CAMTA1; NR2C2; ZNF140; SIX5; ARL2BP; MTA2; MXD1; VSX1; FOXC2; ZNF551; MNDA; NR3C2; NAB2; SALL2; ETV7; SIM1; NR2E1; RUNX2; NKX2-8; PRDM8; ERBB4; HNF1A; HOXD9; SOX15; EBF2; ZNF45; ZNF35; ZNF184; SOX11; ZNF432; SETDB1; HIRA; ZNF768; CEBPE; ZNF764; ID1; POU5F1B; ZNF133; FOXA2; ZNF219; ZNF556; TEAD3; MYCL; ZNF394; ATF6B; WNT4; CCNT1; FOXI1; ZNF211; AEBP1; AR; TP63; FOXN2; ZNF426; NR4A2; ZNF324; RSF1; CDX2; STAT2; TDRD3; NKX2-2; FOXG1; ESRRA; CREBL2; FEV; TRIB3; ZNF227; PAX6; ID4; SATB2; STAT4; ZNF232; TTF2; HOXC13; E4F1; POU4F1; NKX2-1; ZNF165; CEBPA; ZNF76; KMT2D; DLX2; ISL1; HAND2; PAX5; EPAS1; MXD3; ZNF574; HMGA1; POU3F1; MYT1L; HOXD11; SUPT3H; SNAI1; NR4A3; NCOA2; ZNF510; SKI; TWIST1; ATF3; VDR; GRHL2; ZHX2; ZSCAN18; ZNF614; RNF2; ZBED2; ERCC3; KLF13; NR1I2; ZNF562; GCFC2; ZBTB17; HMBOX1; ZNF177; SOX17; ZBTB43; DDIT3; EZH1; SRCAP; ZFHX3; AFF4; OLIG2; E2F5; TCEA1; TULP3; CCNH; TCF21; ING1; SPIB; IRF3; HLF; PGR; ETV6; PCGF3; SALL1; ZIC1; ESRRG; EVX1; ZSCAN5A; KLF11; KAT2B; INSM1; TFAP2C; ZNF160; HAND1; ATN1; SPDEF; E2F1; GLI1; PIAS1; TFDP2; BACH2; PCGF1; ZNF419; L3MBTL1; ZNF3; HEY2; ZSCAN16; HIVEP3; ZNF813; ELK4; LHX1; GFI1; GON4L; TDP2; RORA; ZNF226; MBD1; PROX1; HBP1; ZSCAN12; PAXBP1; ZKSCAN5; TAL1; MBD3; ARHGAP35; ZNF576; ZNF16; FLI1; BNC2; KLF1; ZNF337; FOXA1; OSR2; ZNF83; ARID5A; TBX21; CAPN15; ZNF200; POU2AF1; ZNF654; POLR3F; SMARCB1; NR0B2; HOXD10; FOS; SUPT4H1; GMNN; PEX14; EHMT1; ETV1; PNRC1; ZNF552; NR4A1; CRYM; ZNF107; HHEX; EGR4; LDB1; HOXD3; KLF5; TERF1; PRRX2; HDAC5; BRF2; ID3; HOXC4; HEY1; ZNF787; MAFK; MTF1; NCOA3; HMGXB4; ZNF646; MYF6; HMGA2; TOX; NFE2; E2F8; CERS4; PITX2; TRIM24; NFIC; CREB5; PHIP; PBX2; ZNF205; ZNF14; TGIF2; MECP2; JUNB; FOXO4; RXRA; FOSB; FOXM1; CDK8; ZBTB20; ZFP36L2; ZNF580; THAP1; SMARCD1; HDAC4; CEBPB; ANKRD1; TRPS1; PPP1R13L; EHF; ZNF721; SOX10; MED14; GATA4; ZNF430; ZFX; SP140; PHOX2A; ZNF23; ZKSCAN7; HES1; PITX1; TCF3; HOXB5; PPARG; IRF9; EYA1; DBP; FOXL2; RFXANK; ZNF652; GLI2; MYCN; ESR1; SNAI2; TERF2; ZMYND8; TSC22D3; TRIP11; CITED1; ZEB1; NR2F1; IRF1; SMAD6; MAFG; BCL6; RYBP; ZNF532; TCF7; ELF3; CD3D; ZNF131; PHOX2B; NPAS2; BCL11B; EMX2; ASCL1; BHLHE41; PPARGC1A; PIR; IRF8; NFE2L3; TRIM29; MYB; GATA6; ZNF589; IRF4; IFI16; BRD4; CITED2; RUNX3; KLF7; MECOM; EGR1; IKZF1; TCF4; SMAD1; FOXF1; PAWR; THAP11; TRIM22; PBX1; PPARD; WT1; NFKB2; MAFB; HOXB2; DACH1; SATB1; GATA2; SSBP2
Down-regulation 171 LOXL2; ECD; RHOA; TCERG1; FHL2; ENO1; NCOA4; RBM14; MAGED1; CCNA2; HNRNPD; XBP1; PUF60; HDAC1; EZH2; FLNA; HDAC2; GTF2A2; SMARCA5; PARP1; BHLHE40; ATF1; VEZF1; SMARCC1; EDF1; PAX8; BMI1; NFIL3; NR2F2; CTR9; NEDD8; NRIP1; NONO; PCBD1; USP22; YBX1; HSBP1; BRD8; SOX4; HOXA5; NCOR2; MYCBP; PBRM1; BRD3; NFKBIA; TP53; MYC; NPAT; RBBP4; SMAD2; SNW1; SND1; SCAND1; DEK; SFPQ; TRIM32; RNF10; SUV39H1; HOXC6; TCF12; REST; HOXA10; CENPF; RB1; SMARCE1; BCLAF1; VGLL4; ZBTB1; DDX5; CBFB; SSRP1; NUP62; AFF1; PTTG1; HMG20A; FOSL1; FOXO3; ITGB3BP; UBE2I; SMAD3; HMGB1; BIRC2; WHSC1; ZNF146; MED1; ZBTB18; MEF2A; TGFB1I1; MBD2; NPM1; BASP1; NFE2L1; TSC22D2; NRBF2; MITF; AATF; SP3; SETD3; PURA; ELK3; CCNC; COPS2; DNAJC1; PTRF; RFC1; PRPF6; DDX17; CHD4; STAT6; TFDP1; UBP1; ARID4B; JARID2; TBL1XR1; EED; MED13; HLTF; RNF4; PREB; NELFB; KDM2A; SMARCA2; TLE1; RBBP7; HMGN3; TBL1X; YWHAB; FOXJ3; CNOT1; TFAM; SUB1; RAN; MTDH; ASXL1; CTNNB1; WWTR1; TAF10; HOXB7; ZNF217; SIM2; TADA3; RUNX1; CBX3; SLC2A4RG; FOSL2; ELF1; PSIP1; CRY1; PRKDC; PCGF2; BRCA1; SIAH2; WWC1; ZMIZ1; ERBB2; DMTF1; RERE; ZBTB38; KLF6; REPIN1; BAZ1A; SPEN; CRK; KLF10; ZEB2; ETS2; FOXC1; MEIS1; SOX9; NR3C1; TCFL5