Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04535	Tnfa	GSE9055	Umbilical vein cells	Human	8h	10ng/ml	EID4895

Response Information :

Types	Number	Response transcription factors
Up-regulation	320	AFF3; AJUBA; ALX4; ANKRD30A; ARID1A; ARID5A; ARNTL2; ASCL1; ATF3; ATF5; ATF6; ATN1; BARX1; BASP1; BATF2; BATF3; BAZ1B; BCL11B; BCL9L; BDP1; BHLHE22; BHLHE41; BRD4; BRD8; CARHSP1; CBX2; CD3D; CDK2; CDYL; CEBPA; CEBPD; CENPF; CERS4; CHD2; CHD6; CIITA; CITED1; CITED4; CNOT2; CREB3; CTBP2; CTCFL; DAXX; DLX5; DMRT2; DMRTB1; DOT1L; DR1; E2F2; EBF2; ELK1; EN2; ENO1; EPC1; ESRRB; ESRRG; ESX1; ETS1; ETV7; EYA2; FERD3L; FIGLA; FIZ1; FOSL1; FOXA2; FOXD1; FOXD3; FOXE1; FOXF1; FOXG1; GATA4; GATAD2A; GLI1; GLI2; GLIS1; GMEB1; GRHL3; GRIP1; GTF2A1L; HBP1; HDAC10; HDGF; HELZ2; HEY1; HEYL; HIPK2; HIVEP2; HMX1; HMX2; HNF1B; HNF4A; HNRNPD; HOXB3; HOXC12; HOXC5; HOXC9; HOXD10; HOXD9; HR; IKZF3; IL31RA; ING5; INSM2; IRF1; IRF5; IRF7; IRF9; IRX2; IRX5; ISL1; JAK2; JUNB; KDM1B; KDM5A; KLF14; KLF4; KLF7; KLF8; KLF9; L3MBTL4; LEF1; LHX1; LITAF; LMX1B; LZTS1; MAEL; MAFG; MAPK8IP1; MBD1; MEOX1; MITF; MKL1; MKX; MNDA; MNT; MSC; MSX1; MTF1; MYCL; MYNN; MYOG; MYT1; NAB1; NAB2; NCOA7; NCOR2; NEUROD4; NEUROD6; NFKB1; NFKB2; NFKBIZ; NFX1; NFYA; NOC2L; NPAS1; NPAT; NR1H4; NR2E1; NR4A1; NR4A3; NR6A1; NSD1; NUP62; OLIG3; ONECUT3; OTX1; OVOL1; PAX4; PBRM1; PCBD2; PHF1; PHF2; PITX2; PITX3; POU1F1; POU2F3; POU3F1; POU4F1; POU5F2; POU6F2; PQBP1; PRDM10; PRDM12; PRKDC; PROX2; PRRX1; RARG; RBL1; RBPMS; RELA; RELB; REPIN1; RFX4; RFXAP; RHOA; RORC; RSF1; RXRA; RXRG; SALL3; SATB2; SERTAD2; SHOX2; SIRT7; SIX4; SIX6; SMAD3; SMAD4; SNAI2; SNAPC4; SOX1; SOX10; SOX13; SOX6; SOX7; SOX9; SP100; SP140L; SP5; SP7; SRCAP; SSX1; STAT5A; STAT6; SUFU; TAF4B; TAF6L; TBL1Y; TBX3; TCERG1; TFAP2D; TFE3; THAP5; THAP9; THRA; TLX3; TRIB3; TRIM22; TWIST2; UBE2B; UBTF; URI1; VDR; VGLL1; VGLL4; VHL; WT1; XRCC6; ZBED4; ZBTB24; ZBTB37; ZBTB42; ZBTB43; ZBTB47; ZEB2; ZFHX2; ZFP1; ZFP57; ZFP69B; ZFY; ZIC1; ZIC4; ZIC5; ZMIZ2; ZMYM2; ZNF157; ZNF160; ZNF165; ZNF19; ZNF208; ZNF235; ZNF334; ZNF335; ZNF341; ZNF345; ZNF362; ZNF366; ZNF384; ZNF391; ZNF407; ZNF416; ZNF425; ZNF429; ZNF442; ZNF444; ZNF446; ZNF470; ZNF471; ZNF484; ZNF524; ZNF526; ZNF541; ZNF549; ZNF550; ZNF563; ZNF567; ZNF572; ZNF583; ZNF584; ZNF594; ZNF597; ZNF605; ZNF625; ZNF628; ZNF646; ZNF668; ZNF674; ZNF688; ZNF71; ZNF749; ZNF763; ZNF765; ZNF771; ZNF775; ZNF79; ZNF800; ZNF808; ZNF853; ZNF99; ZXDC
Down-regulation	319	AFF4; AHR; ALX1; ALX3; AR; ARID1B; ARID3B; ARID4A; ARX; ASCL3; ASCL5; BARX2; BCL6B; BCLAF1; BNC2; BPTF; BRD3; BRWD1; BTF3; C1D; CASZ1; CBFA2T2; CBX7; CCAR1; CECR2; CHD7; CREBZF; CREM; CSDC2; CUX2; DACH1; DDX17; DMRT3; DMTF1; DYRK1B; E2F8; EBF3; EGR2; EGR3; EHMT2; EID1; ELK4; EMX2; ERF; ERG; ESR1; ESR2; ETS2; ETV1; ETV5; EYA3; FHL2; FLI1; FOXA3; FOXB1; FOXC1; FOXL1; FOXN3; FOXN4; FOXO1; FOXO3; FOXO4; FOXO6; FOXP1; FOXP2; FOXP3; FOXP4; GATA3; GATA5; GFI1B; GSC2; GSX1; GTF2I; GZF1; HCFC1; HDAC1; HES1; HIPK1; HIVEP3; HLF; HLTF; HMGA2; HOXA10; HOXA11; HOXA2; HOXA5; HOXA7; HOXB5; HOXB7; HOXC11; HOXD11; HOXD4; HSF2; HTATIP2; ID1; ID2; IKBKAP; ING1; ING4; IRF4; IRF6; IRX1; ISX; JMY; KAT2B; KDM5B; KLF12; KLF15; KLF5; KMT2A; KMT2B; KMT2C; KMT2D; LCORL; LHX2; LHX6; LHX9; LIN28B; LMCD1; LMO1; LYL1; MAFB; MBD2; MBD3; MBD4; MDFI; MDM4; MECOM; MED25; MLX; MLXIP; MLXIPL; MYT1L; MZF1; NANOG; NCOA2; NEUROD1; NEUROG1; NFATC1; NFATC2; NFIA; NFRKB; NOBOX; NPAS4; NR0B1; NR1H3; NR2F2; NR3C2; NR4A2; OLIG1; ORC2; OTP; OTX2; PAWR; PAX2; PAX5; PBX1; PBX2; PBXIP1; PEX14; PHF8; PHIP; PIAS4; PKNOX2; PLAG1; PLAGL1; PMS1; POU5F1B; PPARG; PPARGC1B; PRDM13; PRDM16; RBPJL; REL; RERE; RFX2; RFX6; RNF6; RORA; SALL4; SATB1; SCAI; SETD2; SETDB2; SIN3A; SIN3B; SMAD2; SMAD7; SMAD9; SNAI3; SOHLH2; SOX12; SOX14; SOX15; SOX18; SOX2; SPDEF; SPIC; SSBP2; STAT1; SUPT3H; TAF11; TBL1XR1; TBX1; TBX15; TBX22; TBX5; TCEA2; TFAP2A; TFAP2B; TFAP2E; TFDP1; TFEB; TGIF2LY; THAP10; THAP2; THRAP3; TLE1; TLE4; TOX2; TOX3; TP73; TRERF1; TSC22D2; TSC22D3; TSHZ1; TSHZ3; TULP4; TWIST1; UBE3A; WNT4; WWC1; WWTR1; YBX3; YY1; ZBED6; ZBTB18; ZBTB3; ZBTB44; ZBTB7A; ZBTB8A; ZFP2; ZFP30; ZFP36L1; ZFP64; ZGLP1; ZHX1; ZKSCAN8; ZNF101; ZNF114; ZNF117; ZNF154; ZNF155; ZNF174; ZNF215; ZNF224; ZNF225; ZNF236; ZNF248; ZNF25; ZNF287; ZNF30; ZNF324B; ZNF354C; ZNF382; ZNF417; ZNF420; ZNF431; ZNF439; ZNF44; ZNF441; ZNF461; ZNF485; ZNF496; ZNF512B; ZNF517; ZNF521; ZNF529; ZNF536; ZNF544; ZNF552; ZNF554; ZNF562; ZNF564; ZNF569; ZNF573; ZNF575; ZNF595; ZNF599; ZNF614; ZNF626; ZNF630; ZNF652; ZNF654; ZNF660; ZNF672; ZNF680; ZNF687; ZNF711; ZNF736; ZNF76; ZNF780B; ZNF784; ZNF786; ZNF792; ZNF793; ZNF8; ZNF81; ZNF814; ZNF827; ZNF835; ZNF837; ZNF85; ZNF850; ZNF891; ZNF92; ZSCAN1; ZSCAN30; ZSCAN31