Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04534	Tnfa	GSE9055	Umbilical vein cells	Human	7.5h	10ng/ml	EID4894

Response Information :

Types	Number	Response transcription factors
Up-regulation	302	ADRB2; AFF3; ALX4; ANHX; ARID5A; ARNT2; ARNTL2; ARRB1; ATF3; ATF5; BARX1; BATF2; BATF3; BCL11B; BCL9L; BHLHE22; BHLHE23; BHLHE41; BRD4; BRD8; CARHSP1; CASZ1; CDX2; CDYL; CEBPA; CERS4; CIITA; CITED1; CITED4; CREB3; CREB3L3; CRTC1; CRX; CRYM; DAXX; DCC; DLX6; DMBX1; DMRT1; DMRT2; DOT1L; DR1; E2F1; EBF1; EBF2; EHF; ELK1; ENO1; EPC1; ESRRA; ESRRB; ESRRG; ETS1; ETV7; FERD3L; FIGLA; FOSL1; FOXA2; FOXD1; FOXD2; FOXD3; FOXF1; FOXG1; FOXH1; FOXN1; GABPB1; GBX2; GLI2; GMEB1; GRIP1; GSC2; GTF2A1L; HABP4; HDGF; HDX; HELZ2; HES2; HESX1; HEY1; HEYL; HIPK2; HIVEP2; HMX1; HNF1B; HNF4A; HNRNPD; HOXA4; HOXB1; HOXC12; HOXC8; HOXC9; HOXD10; HOXD13; IKZF1; IKZF3; IRF1; IRF5; IRF8; IRF9; IRX2; IRX3; JUNB; KCNIP3; KDM1B; KDM5A; KLF1; KLF14; KLF7; KLF9; L3MBTL4; LEF1; LHX1; LIN28A; LITAF; MAEL; MAF; MAFF; MAFG; MBD1; MED12; MED15; MED24; MESP1; MITF; MKL1; MNT; MSC; MYBBP1A; MYF6; MYNN; MYOCD; MYOD1; MYRF; MYT1; NAB1; NCOA7; NEUROD6; NFATC2; NFE2L3; NFKB1; NFKB2; NFKBIA; NFKBIZ; NFYA; NFYC; NHLH1; NHLH2; NPAT; NR0B2; NR4A3; NR6A1; NRIP1; OLIG2; OLIG3; ONECUT1; ONECUT3; OVOL1; PATZ1; PAX1; PAX4; PBRM1; PCBD2; PCGF1; PEG3; PGR; PHF1; PITX2; POU1F1; POU2F2; POU3F1; POU4F1; POU5F2; PPARA; PPARD; PRDM1; PRDM10; PRDM2; PRMT2; PROX2; PRRX1; PYGO2; RARG; RBL1; RELA; RELB; REPIN1; RNF141; RUNX2; RXRB; SALL1; SATB2; SCRT1; SHOX2; SIAH2; SIRT2; SIRT7; SMAD3; SMAD4; SNAPC4; SOX10; SOX13; SP140L; SP6; SP7; SP8; SRCAP; SSX1; ST18; STAT5A; STAT6; SUFU; TADA1; TAF1C; TAF4B; TAF6L; TBR1; TBX10; TBX3; TCERG1; TCF3; TEAD3; TFE3; TFEC; THRA; TLX2; TLX3; TRIM11; TRIM22; TSC22D1; TWIST2; UBE2B; UBTF; URI1; VDR; VGLL1; VGLL2; VHL; VSX1; WIZ; ZBED4; ZBTB24; ZBTB37; ZBTB40; ZBTB42; ZBTB47; ZBTB7B; ZBTB7C; ZFHX2; ZFP42; ZFP69B; ZFY; ZIC1; ZIC5; ZMIZ2; ZMYM2; ZNF132; ZNF160; ZNF202; ZNF235; ZNF254; ZNF286A; ZNF345; ZNF350; ZNF391; ZNF407; ZNF416; ZNF425; ZNF443; ZNF444; ZNF446; ZNF467; ZNF483; ZNF530; ZNF541; ZNF543; ZNF563; ZNF578; ZNF584; ZNF585B; ZNF594; ZNF620; ZNF621; ZNF625; ZNF628; ZNF646; ZNF664; ZNF683; ZNF688; ZNF697; ZNF71; ZNF749; ZNF829; ZNF836; ZNF852; ZNF853; ZNF90; ZNF99; ZSCAN2; ZSCAN20; ZSCAN4; ZXDB; ZXDC
Down-regulation	315	AHR; ALX1; ALX3; ARID4A; ATF2; BACH2; BARX2; BATF; BBX; BNC2; BPTF; BRD3; BTF3; CAPN15; CBFA2T2; CBFA2T3; CEBPE; CHD7; CREBZF; CREM; DACH1; DEAF1; DLX4; DTX1; E2F8; EBF3; EED; EGR2; EGR3; EHMT2; ELF3; ELK4; ELP2; EMX2; EN1; EP400; EPAS1; ERBB2; ERG; ESR2; ETV1; FEZF2; FHL5; FIZ1; FLI1; FOXA1; FOXA3; FOXB1; FOXC1; FOXI1; FOXJ2; FOXN3; FOXN4; FOXP1; FOXP2; FOXS1; GATA2; GATA3; GATA5; GATAD2B; GCM1; GFI1B; GRHL1; GSX2; HCFC1; HDAC1; HDAC5; HES1; HES7; HIPK1; HLF; HLTF; HLX; HOXA10; HOXA11; HOXA5; HOXA7; HOXB13; HOXB7; HOXD1; HOXD11; HOXD4; ID1; ID2; IKZF4; IL16; ING1; IRF4; IRF6; ISX; KAT2B; KAT6A; KAT7; KDM5B; KLF12; KLF15; KMT2B; KMT2C; KMT2D; L3MBTL1; LCORL; LHX2; LHX6; LIN54; LMCD1; LMO1; MAFB; MBD4; MDFI; MECOM; MED23; MED27; MEF2C; MEIS1; MIER3; MKL2; MLLT6; MLX; MTA3; MXD3; MYB; MYBL1; MYCN; MYRFL; MYSM1; MYT1L; NANOG; NEUROD4; NEUROG3; NFAT5; NFATC1; NFIA; NFX1; NOBOX; NPAS2; NPAS4; NR1H4; NR1I3; NR2F2; NR4A2; NRF1; OTP; OTX2; OVOL2; PAX2; PAX5; PAXBP1; PBX1; PBX2; PBXIP1; PEX14; PHF12; PHIP; PIAS4; PITX1; PKNOX2; PLAGL1; PMS1; POU3F4; PPARG; PPARGC1B; PRDM13; PRDM14; PRDM15; PRDM16; PURA; PURB; RAX2; RBPJL; RERE; RUNX3; RXRG; RYBP; SAFB2; SALL2; SALL4; SAP18; SATB1; SCAI; SIX1; SMAD7; SMAD9; SMARCB1; SOX11; SOX15; SOX18; SOX30; SOX4; SOX8; SP1; SP2; SP5; SPIB; SSBP2; STAT1; STAT2; STAT4; TBL1XR1; TBX1; TBX18; TBX20; TCF4; TCF7L2; TFAP2B; TFCP2L1; TFDP1; TFEB; TGFB1; TGS1; THAP10; TLE4; TONSL; TOX2; TOX3; TP73; TRERF1; TRIM29; TSC22D3; TSHZ1; TSHZ2; TSHZ3; TUB; UBE3A; USF2; WHSC1; WNT4; WWTR1; XBP1; YBX1; YY1; ZBTB18; ZBTB20; ZBTB7A; ZBTB8A; ZFP2; ZFP30; ZFP36L1; ZFP36L2; ZFP64; ZFP90; ZHX1; ZIC2; ZKSCAN1; ZKSCAN8; ZNF154; ZNF184; ZNF215; ZNF248; ZNF25; ZNF250; ZNF268; ZNF30; ZNF324B; ZNF354C; ZNF382; ZNF417; ZNF420; ZNF429; ZNF441; ZNF449; ZNF490; ZNF493; ZNF512B; ZNF519; ZNF521; ZNF528; ZNF536; ZNF544; ZNF554; ZNF555; ZNF566; ZNF568; ZNF571; ZNF599; ZNF606; ZNF607; ZNF614; ZNF626; ZNF641; ZNF649; ZNF652; ZNF653; ZNF660; ZNF672; ZNF677; ZNF684; ZNF705G; ZNF711; ZNF74; ZNF740; ZNF746; ZNF75D; ZNF76; ZNF777; ZNF780A; ZNF782; ZNF783; ZNF789; ZNF792; ZNF8; ZNF80; ZNF808; ZNF81; ZNF814; ZNF831; ZNF844; ZNF85; ZNF850; ZNF865; ZNF91; ZNF92; ZSCAN10; ZSCAN30; ZSCAN31; ZSCAN32