Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID04533	Tnfa	GSE9055	Umbilical vein cells	Human	7h	10ng/ml	EID4893

Response Information :

Types	Number	Response transcription factors
Up-regulation	294	ADRB2; AFF3; ALX4; ARID5A; ARNT; ARNTL2; ARRB1; ASCL2; ATF3; ATF5; ATN1; ATOH1; BARHL1; BATF2; BATF3; BCL9L; BCOR; BDP1; BHLHE23; BHLHE41; BIRC2; CASZ1; CBX2; CCNC; CDX4; CDYL; CEBPD; CERS3; CHD2; CIITA; CITED1; CITED4; CREB3; CREB3L2; CRYM; CTBP2; CTCFL; DAXX; DCC; DLX1; DLX2; DLX6; DMRT2; DMRTA1; DMRTB1; DMRTC2; DNAJC2; E2F2; EBF2; EHF; EOMES; ESRRG; ETS1; ETV7; FERD3L; FIZ1; FOSL1; FOXA2; FOXD3; FOXE1; FOXF1; FOXH1; FOXN1; FOXR2; GABPB1; GATA4; GATAD2A; GBX2; GLI2; GMEB1; GRIP1; HABP4; HBP1; HDAC10; HDGF; HDX; HELZ2; HES2; HES5; HEY1; HEYL; HIVEP2; HMX2; HNF4A; HNRNPD; HOXC12; HOXC5; HOXC9; HOXD13; HSF5; IKZF3; IL31RA; ING5; IRF1; IRF7; IRF9; IRX2; IRX3; IRX5; ISL1; JAK2; JUNB; KDM1B; KLF8; KLF9; L3MBTL4; LHX1; LIMD1; LIN28A; LITAF; LMO1; LMX1A; LMX1B; MAF; MAFF; MAFG; MAPK8IP1; MBD1; MED15; MESP1; MITF; MKL1; MNDA; MNT; MSC; MSX1; MTA2; MYBBP1A; MYBL1; MYCL; MYNN; MYOCD; MYRF; MYT1; NCOA7; NFIX; NFKB1; NFKB2; NFKBIA; NFKBIZ; NFYA; NHLH1; NHLH2; NPAT; NR2E1; NR4A1; NR6A1; NRIP1; NUP62; OLIG2; ONECUT2; ONECUT3; OTX1; OVOL1; PAX4; PBRM1; PBX4; PCBD2; PHF1; PHOX2B; PITX2; POLR2A; POU2F1; POU2F2; POU3F1; PROX1; PROX2; PRRX1; RARA; RARG; RAX2; RELA; RELB; RFX4; RHOA; RNF141; RORA; RORC; RSF1; SALL3; SATB2; SIAH2; SIM2; SIRT7; SIX3; SIX4; SKIL; SMAD3; SMAD4; SNAI2; SNAPC4; SP140L; SP3; SP6; SP7; SRCAP; SSX1; ST18; STAT5A; STAT6; SUFU; TAF4B; TAF6L; TBL1Y; TBX4; TCEA1; TEAD3; TFAP2A; TFDP2; TFE3; THAP3; THAP9; TLX3; TRIB3; TRIM11; TRIM22; TRIM28; TULP1; TWIST2; UBTF; URI1; VDR; VGLL1; VHL; XRCC6; YBX2; ZBED4; ZBTB12; ZBTB24; ZBTB37; ZBTB42; ZBTB43; ZBTB47; ZFP42; ZFY; ZHX3; ZIC1; ZIC3; ZKSCAN3; ZMIZ2; ZMYM2; ZNF160; ZNF19; ZNF214; ZNF219; ZNF235; ZNF254; ZNF264; ZNF286A; ZNF296; ZNF3; ZNF341; ZNF345; ZNF384; ZNF443; ZNF444; ZNF469; ZNF471; ZNF484; ZNF497; ZNF524; ZNF530; ZNF540; ZNF541; ZNF549; ZNF556; ZNF557; ZNF563; ZNF567; ZNF578; ZNF584; ZNF585B; ZNF595; ZNF605; ZNF611; ZNF625; ZNF646; ZNF664; ZNF668; ZNF683; ZNF688; ZNF697; ZNF71; ZNF765; ZNF770; ZNF771; ZNF777; ZNF787; ZNF852; ZNF865; ZNF99; ZSCAN10; ZSCAN2; ZSCAN20
Down-regulation	374	AHR; ANHX; ARID2; ARID3B; ARID4A; ARX; ATF2; ATF6B; ATOH7; BARX2; BATF; BCL11A; BCL6B; BCLAF1; BNC2; BPTF; BRCA1; BRD3; BRDT; BTF3; CARF; CBFA2T2; CBFA2T3; CBX7; CCAR1; CDIP1; CEBPE; CECR2; CERS5; CHAF1B; CHD9; CREBZF; CREM; CTBP1; CUX2; DACH1; DBP; DDX17; DLX4; E2F8; EBF3; EED; EGR2; EGR3; EHMT2; ELK4; ELP2; EMX2; EPAS1; ERF; ERG; ESR1; ESR2; ETV1; ETV3; EWSR1; FEV; FEZF2; FLI1; FOXA1; FOXC1; FOXN3; FOXO1; FOXO3; FOXO6; FOXP1; FOXP2; FOXP3; FOXP4; FUBP1; GATA2; GATA3; GATA5; GATA6; GATAD2B; GLIS1; GSX1; GTF2A1; GTF2I; GTF2IRD2; HAND1; HCFC1; HDAC11; HDAC9; HES1; HES6; HIPK3; HIRA; HIVEP3; HLTF; HLX; HNF4G; HOXA10; HOXA11; HOXA3; HOXA5; HOXA7; HOXB5; HOXB7; HOXC10; HOXD11; HOXD4; HOXD8; ID1; ID2; IL16; ING4; INSR; IRF6; ISX; JUND; KAT2B; KAT6A; KAT7; KDM5B; KLF12; KLF15; KLF16; KLF2; KMT2A; LCORL; LHX2; LHX3; LHX4; LHX6; LIN54; LMCD1; MAFB; MBD2; MBD4; MDFI; MECOM; MECP2; MED23; MED25; MED26; MED27; MEF2C; MEF2D; MEIS1; MGA; MKL2; MLX; MLXIP; MTA3; MYF6; MYRFL; MZF1; NANOG; NEUROD2; NFATC1; NFIA; NFRKB; NFYC; NLK; NPAS2; NR0B1; NR1D2; NR1H3; NR2C1; NR2F2; NR4A2; ONECUT1; OTX2; PATZ1; PAWR; PAX3; PAX5; PAX7; PAX8; PAXBP1; PBX1; PBX2; PBXIP1; PEX14; PEX2; PITX1; PKNOX2; PLAG1; PLAGL1; PMS1; POU3F2; POU6F1; PPARGC1B; PURA; RARB; RBAK; RBFOX2; RBL2; RBM14; RBPJ; RCOR1; REL; RERE; REST; RFX2; RFX7; RNF6; RUVBL2; SALL4; SAP18; SAP30; SATB1; SCAI; SFMBT1; SIM1; SIN3A; SIRT2; SLC2A4RG; SMAD2; SMAD6; SMAD7; SMAD9; SMARCA4; SOX14; SOX18; SOX2; SOX3; SOX5; SOX8; SP1; SP2; SPIB; SREBF1; SREBF2; SSBP2; STAT1; TADA3; TAF1; TAF10; TAF11; TAF7L; TBX1; TBX19; TBX20; TBX22; TBX5; TCF12; TCF3; TCF4; TDRD3; TEAD1; TEF; TFAP2B; TFCP2L1; TFDP1; TFEB; TGFB1; TGIF2LY; TGS1; THAP10; THAP5; THRAP3; TLE1; TLE4; TOX2; TOX3; TP73; TRERF1; TRIM29; TRPS1; TSC22D1; TSC22D3; TSHZ1; TSHZ2; TTF2; TULP2; TWIST1; UBE2I; UTF1; VAX2; WHSC1L1; WNT4; WWTR1; XBP1; YY1; ZBED3; ZBTB1; ZBTB20; ZBTB44; ZBTB45; ZBTB48; ZBTB8A; ZFP14; ZFP3; ZFP30; ZFP36L1; ZFP36L2; ZFP69; ZFP90; ZFP92; ZFX; ZHX1; ZIC2; ZKSCAN1; ZKSCAN7; ZMYND8; ZNF148; ZNF154; ZNF157; ZNF184; ZNF205; ZNF215; ZNF230; ZNF234; ZNF24; ZNF248; ZNF253; ZNF268; ZNF287; ZNF30; ZNF324; ZNF367; ZNF398; ZNF415; ZNF420; ZNF44; ZNF440; ZNF442; ZNF449; ZNF461; ZNF493; ZNF507; ZNF512B; ZNF517; ZNF521; ZNF528; ZNF536; ZNF544; ZNF554; ZNF562; ZNF566; ZNF568; ZNF569; ZNF571; ZNF585A; ZNF589; ZNF597; ZNF599; ZNF600; ZNF607; ZNF614; ZNF624; ZNF626; ZNF627; ZNF630; ZNF652; ZNF667; ZNF672; ZNF678; ZNF680; ZNF684; ZNF696; ZNF711; ZNF717; ZNF74; ZNF75D; ZNF76; ZNF780B; ZNF781; ZNF782; ZNF789; ZNF792; ZNF8; ZNF81; ZNF814; ZNF827; ZNF844; ZNF850; ZNF92; ZSCAN1; ZSCAN18; ZSCAN29; ZSCAN30